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ACD7_5_3

Organism: ACD7

near complete RP 48 / 55 MC: 14 BSCG 42 / 51 MC: 8 ASCG 0 / 38
Location: comp(3049..3594)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 181.0
  • Bit_score: 227
  • Evalue 2.50e-57
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Fusobacterium sp. 1_1_41FAA RepID=D6LI04_9FUSO (db=UNIREF evalue=2.0e-56 bit_score=221.0 identity=59.34 coverage=98.3516483516484) similarity UNIREF
DB: UNIREF
  • Identity: 59.34
  • Coverage: 98.35
  • Bit_score: 221
  • Evalue 2.00e-56
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=2 to=181 evalue=4.1e-89 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-89

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 546
ATGAATATTATAAAAACAAACATAGAAGGAATATTAATTGTTGAACCGAAAGTTTTTGGTGATGAACGGGGATTTTTCGTGGAGACTTATAATTTAGAAAGATATAAAGAAACAGGAATAACCTTGCCTTTTGTCCAAGATAATCTTTCTTCATCAGCCAAGGGGGTTTTACGAGGATTGCATTTTCAGAAGAAACCTTTTGCTCAAGGCAAATTAGTCCAAGTGATAAAAGGAAAGGTTTTGGATGTGGCGGTAGATATTCGTAAAAATTCTCCTACTCGCGGACAGTATGTGGCGATAGAGCTTTCAGGTGAAAATAAAAAACAACTTTGGATTGCTCCAGGATTAGCACACGGATTTCTTTCTCTGGAAGATGCTACAATTTTTAGCTATAAATGCACTAACTTTTATAATTCCACTGCTGAACGCGGGATAATGTGGAATGATAAAGATTTGAATATTGATTGGGAATTTGAAGAATATGGAATTAAAAAACCAATCGTCTCAGAAAAGGACCAAAAAAATCTTTATTTTAGTGAAATGTAA
PROTEIN sequence
Length: 182
MNIIKTNIEGILIVEPKVFGDERGFFVETYNLERYKETGITLPFVQDNLSSSAKGVLRGLHFQKKPFAQGKLVQVIKGKVLDVAVDIRKNSPTRGQYVAIELSGENKKQLWIAPGLAHGFLSLEDATIFSYKCTNFYNSTAERGIMWNDKDLNIDWEFEEYGIKKPIVSEKDQKNLYFSEM*