ggKbase home page

ACD7_40_9 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
hypothetical protein similarity KEGG
DB: KEGG
33.8 337.0 195 2.70e-47 sbe:RAAC3_TM7C01G0635
seg (db=Seg db_id=seg from=2 to=10) iprscan interpro
DB: Seg
null null null null sbe:RAAC3_TM7C01G0635
seg (db=Seg db_id=seg from=133 to=141) iprscan interpro
DB: Seg
null null null null sbe:RAAC3_TM7C01G0635
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=8 to=80 evalue=1.0e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
null null null 1.00e-12 sbe:RAAC3_TM7C01G0635
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=8 to=94 evalue=3.3e-12 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 3.30e-12 sbe:RAAC3_TM7C01G0635
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=29 to=75 evalue=8.4e-12 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 8.40e-12 sbe:RAAC3_TM7C01G0635
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=62 to=73 evalue=9.2e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
null null null 9.20e-08 sbe:RAAC3_TM7C01G0635
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=26 to=38 evalue=9.2e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
null null null 9.20e-08 sbe:RAAC3_TM7C01G0635
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=47 to=62 evalue=9.2e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
null null null 9.20e-08 sbe:RAAC3_TM7C01G0635
RNA_pol_delta (db=HMMPfam db_id=PF05066 from=224 to=285 evalue=7.3e-06 interpro_id=IPR007759 interpro_description=DNA-directed RNA polymerase delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 7.30e-06 sbe:RAAC3_TM7C01G0635
sigma-70 region 4 domain protein alias=ACD7_148.10174.76G0009,ACD7_148.10174.76_9,ACD7_C00040G00009 id=130126 tax=ACD7 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
100.0 null 708 1.40e-201 sbe:RAAC3_TM7C01G0635
Sigma-70 region 4 protein {ECO:0000313|EMBL:EKE21863.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
100.0 354.0 708 4.70e-201 K2FGX1_9BACT