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NECEvent2014_6_7_scaffold_5457_1

Organism: NECEvent2014_6_7_UNK

partial RP 2 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: comp(1..939)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 313.0
  • Bit_score: 622
  • Evalue 3.00e-175
DNA-directed RNA polymerase subunit beta' n=1 Tax=Salmonella enterica subsp. enterica serovar Montevideo str. 8387 RepID=V1U8U5_SALMO similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 313.0
  • Bit_score: 624
  • Evalue 7.30e-176
rpoC; DNA-directed RNA polymerase, beta'-subunit similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 313.0
  • Bit_score: 622
  • Evalue 6.00e-176

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Taxonomy

Salmonella enterica → Salmonella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGAAAGATTTATTAAAGTTTCTGAAAGCGCAGACTAAAGCCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCCTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAACCTGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGACTACGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGTGGTGTGATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTACGCCGTGAGCGTATGGGCCACATCGAGCTGGCGTCTCCGACTGCTCACATCTGGTTCCTGAAATCTCTGCCGTCCCGTATCGGTTTGCTGCTTGATATGCCGCTGCGTGATATCGAACGCGTACTGTACTTCGAATCTTATGTGGTTATCGAAGGCGGTATGACTAACCTGGAACGTCAACAGATCCTGACTGAAGAGCAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTTGACGCGAAGATGGGTGCGGAAGCAATCCAGGCCCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGTGAAACTCTGCGCGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAGAAGCTGACCAAGCGTATCAAACTGCTGGAAGCCTTCGTACAGTCTGGCAACAAGCCAGAGTGGATGATCCTGACCGTTCTGCCGGTTCTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCAACGTCGGATCTGAACGATCTGTATCGTCGCGTTATCAACCGTAACAACCGTCTGAAGCGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGCAACGAAAAACGTATGCTGCAGGAAGCGGTTGACGCCCTGCTGGATAACGGTCGTCGCGGT
PROTEIN sequence
Length: 313
VKDLLKFLKAQTKAEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRG