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NECEvent2014_6_7_scaffold_5457_2

Organism: NECEvent2014_6_7_UNK

partial RP 2 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: comp(1016..1243)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 154
  • Evalue 1.10e-35
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 154
  • Evalue 5.50e-35
DNA-directed RNA polymerase subunit beta n=1 Tax=Escherichia coli P0304816.8 RepID=N4CM19_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 154
  • Evalue 4.00e-35

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
CAGCGCTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATATGGCGCAGCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACTAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAACCAGGCATGCCGGAATCCTTCAACGTACTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAGCTGGAAGACGAGTAA
PROTEIN sequence
Length: 76
QRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE*