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NECEvent2014_6_7_UNK

In projects: NECEvent2014_6_7
Displaying items 201-250 of 283 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_6_7_scaffold_5537 176_007_scaffold_5537
Species: Enterobacter sp. R4-368 (50%)
2 1223 bp 55.85 4.42 100.57
NECEvent2014_6_7_scaffold_6050 176_007_scaffold_6050
Species: Kosakonia radicincitans (50%)
2 1102 bp 56.44 5.17 93.65
NECEvent2014_6_7_scaffold_5539 176_007_scaffold_5539
Species: Escherichia sp. KTE52 (50%)
2 1221 bp 52.01 10.57 86.00
NECEvent2014_6_7_scaffold_5800 176_007_scaffold_5800
Species: Enterobacter asburiae (50%)
2 1159 bp 59.62 36.50 35.98
NECEvent2014_6_7_scaffold_6056 176_007_scaffold_6056
Species: Clostridium sporogenes (100%)
2 1100 bp 33.00 5.18 80.18
NECEvent2014_6_7_scaffold_3756 176_007_scaffold_3756
Species: Klebsiella sp. OBRC7 (50%)
2 1925 bp 56.68 6.39 99.12
NECEvent2014_6_7_scaffold_7516 176_007_scaffold_7516
Species: Clostridium botulinum (50%)
2 1278 bp 50.39 3272.18 62.91
NECEvent2014_6_7_scaffold_7668 176_007_scaffold_7668
Species: Escherichia coli (50%)
2 1159 bp 58.41 5.18 94.48
NECEvent2014_6_7_scaffold_8186 176_007_scaffold_8186
Species: Escherichia coli (50%)
2 1149 bp 51.44 131.33 93.73
NECEvent2014_6_7_scaffold_6072 176_007_scaffold_6072
Species: Mycoplasma sp. CAG:877 (50%)
2 1097 bp 29.35 68.51 71.10
NECEvent2014_6_7_scaffold_4281 176_007_scaffold_4281
Species: Salmonella enterica (50%)
2 1651 bp 40.16 5.27 89.40
NECEvent2014_6_7_scaffold_4045 176_007_scaffold_4045
Species: Clostridium sporogenes (50%)
2 1760 bp 31.76 7.76 87.61
NECEvent2014_6_7_scaffold_3535 176_007_scaffold_3535
Species: Klebsiella oxytoca (50%)
2 2066 bp 51.55 165.03 96.56
NECEvent2014_6_7_scaffold_6351 176_007_scaffold_6351
Species: RBG_13_Deltaproteobacteria_65_10_curated (50%)
2 1042 bp 29.37 6.62 98.18
NECEvent2014_6_7_scaffold_3025 176_007_scaffold_3025
Species: Citrobacter freundii (100%)
2 2444 bp 48.90 12.77 78.07
NECEvent2014_6_7_scaffold_3296 176_007_scaffold_3296
Species: Escherichia coli (100%)
2 2231 bp 54.19 159.95 82.83
NECEvent2014_6_7_scaffold_5089 176_007_scaffold_5089
Species: RIFOXYB12_FULL_Sulfurimonas_35_9_curated (50%)
2 1349 bp 26.46 70.50 86.06
NECEvent2014_6_7_scaffold_5857 176_007_scaffold_5857
Species: Enterobacter asburiae (50%)
2 1143 bp 55.12 10.63 77.95
NECEvent2014_6_7_scaffold_4073 176_007_scaffold_4073
Species: Salmonella enterica (100%)
2 1748 bp 49.26 44.28 79.81
NECEvent2014_6_7_scaffold_4333 176_007_scaffold_4333
Species: Enterobacter sp. R4-368 (50%)
2 1629 bp 50.28 5.71 61.69
NECEvent2014_6_7_scaffold_5101 176_007_scaffold_5101
Species: Coprobacillus sp. 29_1 (50%)
2 1344 bp 41.89 8.26 52.90
NECEvent2014_6_7_scaffold_4334 176_007_scaffold_4334
Species: Citrobacter freundii (50%)
2 2649 bp 50.21 66.76 93.43
NECEvent2014_6_7_scaffold_5870 176_007_scaffold_5870
Species: Escherichia coli (50%)
2 1141 bp 34.71 5.92 69.94
NECEvent2014_6_7_scaffold_4592 176_007_scaffold_4592
Species: human gut metagenome (50%)
2 1520 bp 51.84 1680.00 11.84
NECEvent2014_6_7_scaffold_4599 176_007_scaffold_4599
Species: Kosakonia sacchari (50%)
2 1517 bp 50.23 5.14 70.20
NECEvent2014_6_7_scaffold_5628 176_007_scaffold_5628
Species: Pseudomonas fluorescens (50%)
2 1203 bp 38.07 5.24 83.29
NECEvent2014_6_7_scaffold_6402 176_007_scaffold_6402
Species: Clostridium botulinum (100%)
2 1030 bp 27.96 4.95 94.66
NECEvent2014_6_7_scaffold_5380 176_007_scaffold_5380
Species: Streptococcus parasanguinis (100%)
1 1268 bp 30.60 3.79 99.84
NECEvent2014_6_7_scaffold_6409 176_007_scaffold_6409
Species: Clostridium beijerinckii (100%)
1 1029 bp 30.42 57.58 96.21
NECEvent2014_6_7_scaffold_5648 176_007_scaffold_5648
Species: Clostridium celatum (100%)
1 1198 bp 39.07 464.52 99.67
NECEvent2014_6_7_scaffold_6416 176_007_scaffold_6416
Species: Enterobacter sp. YD4 (100%)
1 1027 bp 54.14 8.62 99.90
NECEvent2014_6_7_scaffold_5393 176_007_scaffold_5393
Species: Clostridium botulinum (100%)
1 1264 bp 28.72 4.03 96.12
NECEvent2014_6_7_scaffold_2323 176_007_scaffold_2323
Species: Acinetobacter baumannii (100%)
1 3373 bp 61.43 34.78 99.97
NECEvent2014_6_7_scaffold_5915 176_007_scaffold_5915
Species: Clostridium butyricum (100%)
1 1132 bp 32.51 94.35 99.91
NECEvent2014_6_7_scaffold_5663 176_007_scaffold_5663
Species: Clostridium butyricum (100%)
1 1194 bp 30.65 98.87 95.48
NECEvent2014_6_7_scaffold_3875 176_007_scaffold_3875
Species: Ascaris suum (100%)
1 1847 bp 49.65 94.21 5.85
NECEvent2014_6_7_scaffold_6438 176_007_scaffold_6438
Species: Shigella flexneri (100%)
1 1024 bp 51.17 74.27 99.90
NECEvent2014_6_7_scaffold_3623 176_007_scaffold_3623
Species: Caldicellulosiruptor bescii (100%)
1 2012 bp 30.72 98.11 88.27
NECEvent2014_6_7_scaffold_4650 176_007_scaffold_4650
Species: Pantoea sp. PSNIH2 (100%)
1 1498 bp 47.73 46.66 66.89
NECEvent2014_6_7_scaffold_5167 176_007_scaffold_5167
Species: Clostridium saccharobutylicum (100%)
1 1325 bp 23.92 67.70 51.17
NECEvent2014_6_7_scaffold_5936 176_007_scaffold_5936
Species: Enterobacter asburiae (100%)
1 1129 bp 51.73 64.57 99.91
NECEvent2014_6_7_scaffold_3396 176_007_scaffold_3396
Species: Ascaris suum (100%)
1 2155 bp 48.45 102.46 5.71
NECEvent2014_6_7_scaffold_6476 176_007_scaffold_6476
Species: Clostridium sporogenes (100%)
1 1019 bp 27.38 2.65 81.84
NECEvent2014_6_7_scaffold_4434 176_007_scaffold_4434
Species: Citrobacter freundii (100%)
1 1585 bp 44.16 11.64 77.60
NECEvent2014_6_7_scaffold_3418 176_007_scaffold_3418
Species: [Clostridium] spiroforme (100%)
1 2139 bp 29.55 142.22 97.76
NECEvent2014_6_7_scaffold_4957 176_007_scaffold_4957
Species: [Clostridium] spiroforme (100%)
1 1400 bp 31.57 146.57 99.86
NECEvent2014_6_7_scaffold_5982 176_007_scaffold_5982
Species: Shigella flexneri (100%)
1 1119 bp 47.72 32.71 69.17
NECEvent2014_6_7_scaffold_3683 176_007_scaffold_3683
Species: Staphylococcus epidermidis (100%)
1 1968 bp 40.40 20.66 99.85
NECEvent2014_6_7_scaffold_5990 176_007_scaffold_5990
Species: Staphylococcus epidermidis (100%)
1 1117 bp 44.85 15.98 99.64
NECEvent2014_6_7_scaffold_6246 176_007_scaffold_6246
Species: Citrobacter freundii (100%)
1 1060 bp 51.04 94.39 99.91
Displaying items 201-250 of 283 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.