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NECEvent2014_7_3_UNK

In projects: NECEvent2014_7_3
Displaying items 101-150 of 400 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_7_3_scaffold_3852 177_003_scaffold_3852
Species: Klebsiella oxytoca (100%)
1 1275 bp 59.76 4.82 100.00
NECEvent2014_7_3_scaffold_4454 177_003_scaffold_4454
Species: Salmonella enterica (100%)
1 1114 bp 62.21 4.85 99.91
NECEvent2014_7_3_scaffold_4768 177_003_scaffold_4768
Species: Enterobacter cloacae (100%)
1 1050 bp 59.14 4.86 99.71
NECEvent2014_7_3_scaffold_3521 177_003_scaffold_3521
Genus: Enterobacter (66.67%)
3 1421 bp 49.96 4.86 82.34
NECEvent2014_7_3_scaffold_3454 177_003_scaffold_3454
Species: Lachnospiraceae bacterium COE1 (50%)
2 1446 bp 34.37 4.88 98.76
NECEvent2014_7_3_scaffold_4959 177_003_scaffold_4959
Order: Enterobacteriales (100%)
3 1007 bp 54.72 4.92 101.29
NECEvent2014_7_3_scaffold_3303 177_003_scaffold_3303
Species: Salmonella enterica (50%)
2 1520 bp 47.89 4.93 50.92
NECEvent2014_7_3_scaffold_3308 177_003_scaffold_3308
Species: Enterobacter sp. 35683 (66.67%)
3 1517 bp 54.25 4.94 95.32
NECEvent2014_7_3_scaffold_2128 177_003_scaffold_2128
Species: Enterobacter cloacae (66.67%)
3 2707 bp 48.02 4.99 93.87
NECEvent2014_7_3_scaffold_3132 177_003_scaffold_3132
Order: Enterobacteriales (100%)
5 1619 bp 50.09 5.00 84.31
NECEvent2014_7_3_scaffold_3476 177_003_scaffold_3476
Species: Enterobacter sp. 35683 (66.67%)
3 1437 bp 48.16 5.01 83.09
NECEvent2014_7_3_scaffold_4383 177_003_scaffold_4383
Species: Enterobacter cloacae (50%)
2 1129 bp 55.36 5.05 91.41
NECEvent2014_7_3_scaffold_2711 177_003_scaffold_2711
Species: Enterobacter sp. 35683 (50%)
2 1959 bp 58.96 5.05 98.77
NECEvent2014_7_3_scaffold_3157 177_003_scaffold_3157
Species: Enterobacter cloacae (100%)
2 1602 bp 41.45 5.06 50.75
NECEvent2014_7_3_scaffold_4690 177_003_scaffold_4690
Species: Escherichia coli (50%)
2 1068 bp 52.72 5.06 87.64
NECEvent2014_7_3_scaffold_4965 177_003_scaffold_4965
Genus: Enterobacter (66.67%)
3 1006 bp 52.68 5.07 90.36
NECEvent2014_7_3_scaffold_3090 177_003_scaffold_3090 3 1642 bp 29.54 5.12 63.76
NECEvent2014_7_3_scaffold_4751 177_003_scaffold_4751
Order: Enterobacteriales (66.67%)
3 1055 bp 45.88 5.12 70.24
NECEvent2014_7_3_scaffold_2950 177_003_scaffold_2950
Species: Citrobacter sp. KTE151 (100%)
3 1749 bp 56.09 5.15 89.88
NECEvent2014_7_3_scaffold_4286 177_003_scaffold_4286
Species: Citrobacter freundii (50%)
2 1152 bp 53.39 5.21 97.40
NECEvent2014_7_3_scaffold_1824 177_003_scaffold_1824
Phylum: Firmicutes (80%)
5 3227 bp 36.16 5.21 98.54
NECEvent2014_7_3_scaffold_4831 177_003_scaffold_4831
Species: Enterobacter cloacae (50%)
2 1034 bp 57.64 5.22 89.07
NECEvent2014_7_3_scaffold_4714 177_003_scaffold_4714
Genus: Enterobacter (66.67%)
3 1064 bp 57.24 5.22 100.94
NECEvent2014_7_3_scaffold_3922 177_003_scaffold_3922
Species: Enterobacter sp. 35683 (100%)
2 1256 bp 59.24 5.25 98.89
NECEvent2014_7_3_scaffold_3229 177_003_scaffold_3229
Genus: Citrobacter (66.67%)
3 1564 bp 50.32 5.27 86.32
NECEvent2014_7_3_scaffold_3777 177_003_scaffold_3777
Species: Citrobacter youngae (100%)
1 1306 bp 51.68 5.28 95.79
NECEvent2014_7_3_scaffold_3279 177_003_scaffold_3279
Species: Citrobacter sp. KTE151 (50%)
2 1534 bp 53.85 5.28 91.72
NECEvent2014_7_3_scaffold_4136 177_003_scaffold_4136
Species: Citrobacter freundii (50%)
2 1192 bp 57.47 5.29 97.40
NECEvent2014_7_3_scaffold_3395 177_003_scaffold_3395
Species: Enterobacter sp. 35699 (66.67%)
3 1473 bp 42.29 5.30 87.98
NECEvent2014_7_3_scaffold_2185 177_003_scaffold_2185
Species: Enterobacter asburiae (100%)
4 2614 bp 55.78 5.34 95.49
NECEvent2014_7_3_scaffold_2206 177_003_scaffold_2206
Species: Klebsiella pneumoniae (50%)
2 2585 bp 35.90 5.34 91.45
NECEvent2014_7_3_scaffold_3313 177_003_scaffold_3313
Species: Enterobacter cloacae (75%)
4 1515 bp 30.50 5.35 86.34
NECEvent2014_7_3_scaffold_4001 177_003_scaffold_4001
Species: Citrobacter amalonaticus (50%)
2 1232 bp 52.11 5.36 85.47
NECEvent2014_7_3_scaffold_4352 177_003_scaffold_4352
Species: Enterobacter sp. 35683 (100%)
1 1136 bp 53.35 5.41 86.09
NECEvent2014_7_3_scaffold_3263 177_003_scaffold_3263
Species: Lelliottia amnigena (50%)
2 1543 bp 57.74 5.44 97.41
NECEvent2014_7_3_scaffold_2025 177_003_scaffold_2025
Species: Salmonella enterica (50%)
4 2855 bp 46.37 5.46 88.16
NECEvent2014_7_3_scaffold_4205 177_003_scaffold_4205
Species: Desulfovibrio sp. X2 (100%)
1 1176 bp 32.40 5.48 68.11
NECEvent2014_7_3_scaffold_4107 177_003_scaffold_4107
Species: Citrobacter freundii (100%)
2 1198 bp 44.66 5.51 93.91
NECEvent2014_7_3_scaffold_3732 177_003_scaffold_3732
Species: Citrobacter freundii (50%)
2 1324 bp 51.13 5.55 97.21
NECEvent2014_7_3_scaffold_3428 177_003_scaffold_3428
Species: Siccibacter turicensis (100%)
1 1457 bp 48.59 5.56 99.86
NECEvent2014_7_3_scaffold_4941 177_003_scaffold_4941
Species: Enterobacter cloacae (100%)
1 1012 bp 56.92 5.63 99.90
NECEvent2014_7_3_scaffold_4964 177_003_scaffold_4964
Species: Shewanella decolorationis (50%)
2 1007 bp 60.48 5.66 100.10
NECEvent2014_7_3_scaffold_3738 177_003_scaffold_3738
Species: Enterobacter cloacae (66.67%)
3 1322 bp 51.59 5.67 69.44
NECEvent2014_7_3_scaffold_3815 177_003_scaffold_3815
Species: Citrobacter sp. KTE151 (50%)
2 1289 bp 39.41 5.70 37.47
NECEvent2014_7_3_scaffold_2479 177_003_scaffold_2479
Order: Enterobacteriales (66.67%)
3 2199 bp 41.16 5.73 87.04
NECEvent2014_7_3_scaffold_4405 177_003_scaffold_4405
Species: Escherichia coli (50%)
2 1125 bp 53.96 5.73 91.73
NECEvent2014_7_3_scaffold_3467 177_003_scaffold_3467
Species: Staphylococcus cohnii (50%)
2 1441 bp 30.53 5.73 61.83
NECEvent2014_7_3_scaffold_4793 177_003_scaffold_4793
Order: Enterobacteriales (75%)
4 1045 bp 50.24 5.74 95.02
NECEvent2014_7_3_scaffold_4297 177_003_scaffold_4297
Species: Citrobacter sp. KTE151 (50%)
2 1149 bp 45.87 5.74 86.68
NECEvent2014_7_3_scaffold_4154 177_003_scaffold_4154
Order: Enterobacteriales (100%)
3 1188 bp 53.20 5.81 93.94
Displaying items 101-150 of 400 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.