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NECEvent2014_8_3_scaffold_2223_3

Organism: NECEvent2014_8_3_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: 1564..2316

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 250.0
  • Bit_score: 337
  • Evalue 1.50e-89
truA; tRNA pseudouridine(38-40) synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 250.0
  • Bit_score: 327
  • Evalue 2.50e-87
tRNA pseudouridine synthase A n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU25_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 250.0
  • Bit_score: 322
  • Evalue 2.80e-85

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Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 753
ATGAGAAACATAAAAATGTTATTACAATATGATGGAACAAGATATAAGGGATGGCAAAAGCAGAATCAAAAAGGCAATTCTGTTGTAACAATACAAGGAAAAATCGAAAATGTTTTAAGTAAAATGACAGGGGAGGAAATAGAAGTAATAGGTTGTGGCAGAACAGATTCTGGAGTTCATGCAGATAATTATGTGGCAAACTTCTTTACTGATTCAAAAATGACTTTAGTGGAAATGATGAGTTATCTTGAAGAATATTTACCAGAGGATATTGTGGTTAAAGAACTTAAGATAGCAAGTGATAGGTTTCACTCTAGGTTAAATGTAAAGGGAAAAACCTATGTGTATTCAATTCAAAACACAAAATATCAAGATGTATTTTCCAAGAGATTTGCTTATCATATAAAAGAAGAATTAGATATAGAAAGTATGAGAGAAGGTGCAAAGTATCTTATAGGCACTCATGATTTTAAGAGTTTTACTAATTTAAAAGTAAAGAATGGTAAAAAGTCCACTATAAGAACTATAAGGGATATAAAAATAACAAATTATAATGGATTTGTACAAATAGAAGTAAGTGGAAATGGATTTCTGTTAAATATGGTAAGAATAATTGTAGGAACATTAGTAGAGGTTGGAGTTCATAAAAGGAATCCAGAAGATATTAAAGAGATATTAGAGTCTAAGAATAGAGAAAATTCAGGTCTAAAGGTTCCAGGGAAAGGATTAATGCTTAAAAATTTAGAATATTAA
PROTEIN sequence
Length: 251
MRNIKMLLQYDGTRYKGWQKQNQKGNSVVTIQGKIENVLSKMTGEEIEVIGCGRTDSGVHADNYVANFFTDSKMTLVEMMSYLEEYLPEDIVVKELKIASDRFHSRLNVKGKTYVYSIQNTKYQDVFSKRFAYHIKEELDIESMREGAKYLIGTHDFKSFTNLKVKNGKKSTIRTIRDIKITNYNGFVQIEVSGNGFLLNMVRIIVGTLVEVGVHKRNPEDIKEILESKNRENSGLKVPGKGLMLKNLEY*