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NECEvent2014_8_4_UNK

In projects: NECEvent2014_8_4
Displaying items 101-127 of 127 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_3624 178_004_scaffold_3624
Species: Cronobacter malonaticus (50%)
2 1716 bp 54.37 38.55 85.84
NECEvent2014_8_4_scaffold_5681 178_004_scaffold_5681 1 1007 bp 49.16 63.16 7.25
NECEvent2014_8_4_scaffold_3521 178_004_scaffold_3521 9 1762 bp 44.10 64.70 38.59
NECEvent2014_8_4_scaffold_5601 178_004_scaffold_5601
Species: Streptococcus anginosus (50%)
2 1030 bp 47.38 72.38 21.07
NECEvent2014_8_4_scaffold_4639 178_004_scaffold_4639
Species: Salmonella enterica (100%)
1 1286 bp 51.01 74.18 27.53
NECEvent2014_8_4_scaffold_3400 178_004_scaffold_3400
Species: Trichuris trichiura (100%)
1 1832 bp 48.69 84.66 6.71
NECEvent2014_8_4_scaffold_993 178_004_scaffold_993
Species: Enterobacter cloacae (50%)
8 6597 bp 47.40 87.84 93.50
NECEvent2014_8_4_scaffold_5239 178_004_scaffold_5239 5 1114 bp 33.30 95.60 40.31
NECEvent2014_8_4_scaffold_2038 178_004_scaffold_2038 3 3186 bp 44.88 96.00 5.96
NECEvent2014_8_4_scaffold_3090 178_004_scaffold_3090
Species: Enterococcus hirae (66.67%)
3 2032 bp 37.89 109.62 42.82
NECEvent2014_8_4_scaffold_4945 178_004_scaffold_4945
Species: Enterobacter cloacae (100%)
1 1195 bp 58.91 118.37 99.92
NECEvent2014_8_4_scaffold_3658 178_004_scaffold_3658
Species: Clostridium baratii (100%)
2 1698 bp 34.75 146.11 99.82
NECEvent2014_8_4_scaffold_5420 178_004_scaffold_5420
Species: Enterobacter cloacae (100%)
1 1067 bp 52.58 150.98 99.81
NECEvent2014_8_4_scaffold_4440 178_004_scaffold_4440
Genus: Enterobacter (50%)
4 1354 bp 45.27 185.45 101.70
NECEvent2014_8_4_scaffold_3094 178_004_scaffold_3094
Species: Pseudomonas alcaligenes (50%)
4 2026 bp 56.91 236.92 79.37
NECEvent2014_8_4_scaffold_4936 178_004_scaffold_4936
Species: Clostridium celatum (100%)
1 1198 bp 39.07 243.78 99.67
NECEvent2014_8_4_scaffold_4789 178_004_scaffold_4789
Species: Kluyvera ascorbata (50%)
2 1244 bp 66.80 261.90 101.53
NECEvent2014_8_4_scaffold_3030 178_004_scaffold_3030
Genus: Enterobacter (66.67%)
3 2675 bp 47.55 355.01 89.27
NECEvent2014_8_4_scaffold_5335 178_004_scaffold_5335
Species: Citrobacter sp. MGH 55 (50%)
2 1735 bp 54.70 540.78 100.98
NECEvent2014_8_4_scaffold_4487 178_004_scaffold_4487
Species: Escherichia coli (50%)
2 1337 bp 48.39 545.47 85.27
NECEvent2014_8_4_scaffold_2320 178_004_scaffold_2320
Order: Enterobacteriales (100%)
3 3877 bp 53.62 566.57 94.02
NECEvent2014_8_4_scaffold_5490 178_004_scaffold_5490
Species: Escherichia coli (100%)
1 1052 bp 44.49 635.08 42.78
NECEvent2014_8_4_scaffold_3777 178_004_scaffold_3777
Species: Siccibacter turicensis (100%)
1 1637 bp 47.10 701.89 88.52
NECEvent2014_8_4_scaffold_2528 178_004_scaffold_2528
Species: uncultured bacterium (66.67%)
3 2596 bp 51.16 880.99 24.38
NECEvent2014_8_4_scaffold_5045 178_004_scaffold_5045 0 1169 bp 49.19 924.12 0.00
NECEvent2014_8_4_scaffold_4909 178_004_scaffold_4909
Species: Salmonella enterica (100%)
1 1204 bp 47.59 1287.46 83.47
NECEvent2014_8_4_scaffold_5099 178_004_scaffold_5099
Species: [Clostridium] papyrosolvens (100%)
1 1152 bp 50.78 2943.88 13.54
Displaying items 101-127 of 127 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.