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NECEvent2014_8_5_UNK

In projects: NECEvent2014_8_5
Displaying items 51-100 of 187 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_5_scaffold_2462 178_005_scaffold_2462
Species: Finegoldia magna (50%)
4 3934 bp 30.78 14.91 99.75
NECEvent2014_8_5_scaffold_4006 178_005_scaffold_4006
Species: Pseudomonas alcaligenes (50%)
4 2026 bp 56.91 238.40 79.37
NECEvent2014_8_5_scaffold_4529 178_005_scaffold_4529
Species: Tyzzerella nexilis (75%)
4 1691 bp 44.41 8.69 95.45
NECEvent2014_8_5_scaffold_2753 178_005_scaffold_2753
Species: Peptostreptococcus sp. MV1 (100%)
4 3386 bp 29.42 7.27 98.52
NECEvent2014_8_5_scaffold_3009 178_005_scaffold_3009
Order: Clostridiales (75%)
4 2997 bp 29.86 7.06 87.29
NECEvent2014_8_5_scaffold_4306 178_005_scaffold_4306
Species: Peptoniphilus duerdenii (50%)
4 1818 bp 32.62 7.84 88.45
NECEvent2014_8_5_scaffold_3029 178_005_scaffold_3029
Species: Eubacterium rectale CAG:36 (75%)
4 2969 bp 34.83 7.43 96.50
NECEvent2014_8_5_scaffold_2786 178_005_scaffold_2786
Species: Streptococcus uberis (100%)
4 3333 bp 33.33 8.19 91.72
NECEvent2014_8_5_scaffold_6094 178_005_scaffold_6094
Order: Clostridiales (100%)
3 1068 bp 31.09 8.99 64.33
NECEvent2014_8_5_scaffold_3563 178_005_scaffold_3563
Order: Clostridiales (66.67%)
3 2404 bp 33.82 13.29 82.61
NECEvent2014_8_5_scaffold_4333 178_005_scaffold_4333
Species: Staphylococcus aureus (66.67%)
3 1800 bp 30.72 6.75 93.17
NECEvent2014_8_5_scaffold_4608 178_005_scaffold_4608
Order: Enterobacteriales (100%)
3 1648 bp 47.09 47.15 60.07
NECEvent2014_8_5_scaffold_2572 178_005_scaffold_2572
Species: Roseburia inulinivorans (66.67%)
3 3695 bp 43.92 9.17 99.13
NECEvent2014_8_5_scaffold_3341 178_005_scaffold_3341
Species: human gut metagenome (66.67%)
3 2611 bp 28.15 8.22 88.59
NECEvent2014_8_5_scaffold_4109 178_005_scaffold_4109
Genus: Anaerococcus (66.67%)
3 1955 bp 27.83 12.97 80.72
NECEvent2014_8_5_scaffold_5531 178_005_scaffold_5531 3 1250 bp 49.76 169.44 77.52
NECEvent2014_8_5_scaffold_5280 178_005_scaffold_5280
Species: Catenibacterium sp. CAG:290 (66.67%)
3 1337 bp 33.28 8.98 99.18
NECEvent2014_8_5_scaffold_4641 178_005_scaffold_4641 3 1630 bp 53.99 414.66 31.10
NECEvent2014_8_5_scaffold_4135 178_005_scaffold_4135
Genus: Staphylococcus (66.67%)
3 1937 bp 30.87 14.17 76.82
NECEvent2014_8_5_scaffold_5300 178_005_scaffold_5300
Species: Coprococcus catus (100%)
3 1330 bp 31.43 5.53 67.89
NECEvent2014_8_5_scaffold_4398 178_005_scaffold_4398
Phylum: Firmicutes (66.67%)
3 1759 bp 29.33 7.93 61.74
NECEvent2014_8_5_scaffold_6170 178_005_scaffold_6170
Species: Actinomyces europaeus (100%)
3 1050 bp 53.71 2.29 99.14
NECEvent2014_8_5_scaffold_5052 178_005_scaffold_5052 3 1439 bp 26.75 60.04 79.85
NECEvent2014_8_5_scaffold_5821 178_005_scaffold_5821
Genus: Enterobacter (66.67%)
3 1161 bp 53.49 74.81 82.08
NECEvent2014_8_5_scaffold_3901 178_005_scaffold_3901 3 2111 bp 46.33 81.50 16.82
NECEvent2014_8_5_scaffold_4926 178_005_scaffold_4926
Order: Clostridiales (66.67%)
3 1492 bp 26.61 7.44 82.44
NECEvent2014_8_5_scaffold_4929 178_005_scaffold_4929 3 1492 bp 45.84 143.67 65.35
NECEvent2014_8_5_scaffold_3397 178_005_scaffold_3397
Genus: Anaerococcus (66.67%)
3 2558 bp 31.24 12.84 80.81
NECEvent2014_8_5_scaffold_2380 178_005_scaffold_2380
Species: Clostridium sulfidigenes (66.67%)
3 4095 bp 32.33 44.51 87.91
NECEvent2014_8_5_scaffold_5865 178_005_scaffold_5865
Genus: Enterobacter (66.67%)
3 1139 bp 52.06 59.53 84.02
NECEvent2014_8_5_scaffold_5869 178_005_scaffold_5869
Species: Staphylococcus aureus (66.67%)
3 1138 bp 33.83 3.95 99.91
NECEvent2014_8_5_scaffold_3941 178_005_scaffold_3941
Species: Ruminococcus lactaris (66.67%)
3 2079 bp 44.30 7.00 94.23
NECEvent2014_8_5_scaffold_4971 178_005_scaffold_4971
Order: Clostridiales (100%)
3 1475 bp 43.25 6.81 97.02
NECEvent2014_8_5_scaffold_3699 178_005_scaffold_3699
Order: Clostridiales (100%)
3 2288 bp 26.88 8.52 98.60
NECEvent2014_8_5_scaffold_2423 178_005_scaffold_2423
Order: Clostridiales (100%)
3 3993 bp 42.93 8.30 97.82
NECEvent2014_8_5_scaffold_5384 178_005_scaffold_5384
Phylum: Firmicutes (66.67%)
3 1296 bp 26.77 20.02 80.32
NECEvent2014_8_5_scaffold_3719 178_005_scaffold_3719
Species: Peptoniphilus harei (66.67%)
3 2273 bp 28.60 11.09 84.34
NECEvent2014_8_5_scaffold_5917 178_005_scaffold_5917 3 1123 bp 35.26 3.74 64.38
NECEvent2014_8_5_scaffold_3223 178_005_scaffold_3223
Domain: Bacteria (66.67%)
3 2749 bp 29.90 6.28 51.29
NECEvent2014_8_5_scaffold_2713 178_005_scaffold_2713
Order: Clostridiales (100%)
3 3459 bp 28.42 7.81 97.31
NECEvent2014_8_5_scaffold_3995 178_005_scaffold_3995
Species: Peptoniphilus lacrimalis (66.67%)
3 2033 bp 33.05 14.68 94.00
NECEvent2014_8_5_scaffold_2716 178_005_scaffold_2716
Species: Faecalibacterium prausnitzii (66.67%)
3 3454 bp 23.65 8.08 88.59
NECEvent2014_8_5_scaffold_3746 178_005_scaffold_3746
Order: Clostridiales (66.67%)
3 2248 bp 25.00 9.14 77.27
NECEvent2014_8_5_scaffold_2979 178_005_scaffold_2979
Order: Selenomonadales (66.67%)
3 3037 bp 51.17 278.51 42.08
NECEvent2014_8_5_scaffold_5426 178_005_scaffold_5426
Species: Coprococcus catus (100%)
3 1279 bp 45.35 7.97 101.10
NECEvent2014_8_5_scaffold_4798 178_005_scaffold_4798
Species: Enterococcus faecium (66.67%)
3 1548 bp 34.56 47.67 82.36
NECEvent2014_8_5_scaffold_6312 178_005_scaffold_6312
Species: Staphylococcus epidermidis (66.67%)
3 1010 bp 29.70 5.20 73.07
NECEvent2014_8_5_scaffold_5459 178_005_scaffold_5459
Species: Tyzzerella nexilis (66.67%)
3 1270 bp 43.54 6.73 55.98
NECEvent2014_8_5_scaffold_2772 178_005_scaffold_2772
Species: human gut metagenome (100%)
3 3357 bp 29.43 8.67 97.23
NECEvent2014_8_5_scaffold_5470 178_005_scaffold_5470
Species: human gut metagenome (100%)
3 1267 bp 29.91 9.12 94.95
Displaying items 51-100 of 187 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.