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NECEvent2014_3_4_scaffold_96

Alias: 173_002_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_96_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80..1144
DNA (1065bp) protein (355aa)
gluP; rhomboid protease GluP (EC:3.4.21.105)
UPI0003D61AEF related cluster n=1 Tax=unknown RepID=UPI0003D61AEF rbh
Rhomboid family protein {ECO:0000313|EMBL:ETI89162.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_3_4_scaffold_96_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1202..1837
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AH88_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87570.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_96_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2016..3362
DNA (1347bp) protein (449aa)
gluD; glutamate dehydrogenase (EC:1.4.1.2)
UPI0003D5B0C3 related cluster n=1 Tax=unknown RepID=UPI0003D5B0C3 rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_3_4_scaffold_96_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3763..5151
DNA (1389bp) protein (463aa)
Glycosyl transferase, family 2 n=2 Tax=Clostridium butyricum RepID=M8KAV9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31510.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycosyl transferase family protein
NECEvent2014_3_4_scaffold_96_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5728..7677
DNA (1950bp) protein (650aa)
UPI0003D5F1BB related cluster n=1 Tax=unknown RepID=UPI0003D5F1BB rbh
DNA gyrase subunit B {ECO:0000313|EMBL:KHD15844.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
DNA topoisomerase IV subunit B
NECEvent2014_3_4_scaffold_96_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7722..10637
DNA (2916bp) protein (972aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
UPI0003D64CB9 related cluster n=1 Tax=unknown RepID=UPI0003D64CB9 rbh
DNA topoisomerase IV subunit A
NECEvent2014_3_4_scaffold_96_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10834..11388
DNA (555bp) protein (185aa)
UPI0003AAC03D related cluster n=1 Tax=unknown RepID=UPI0003AAC03D rbh
DJ-1/YajL/PfpI superfamily protein {ECO:0000313|EMBL:KJZ87576.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
DJ-1 family protein
NECEvent2014_3_4_scaffold_96_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11451..13217
DNA (1767bp) protein (589aa)
recJ2; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
UPI0003D5B1A8 related cluster n=1 Tax=unknown RepID=UPI0003D5B1A8 rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ETI89155.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_3_4_scaffold_96_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13654..14706
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UPI0003D67F78 related cluster n=1 Tax=unknown RepID=UPI0003D67F78 rbh
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
NECEvent2014_3_4_scaffold_96_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14859..15284
DNA (426bp) protein (142aa)
UPI0003D64940 related cluster n=1 Tax=unknown RepID=UPI0003D64940
Flavodoxin {ECO:0000313|EMBL:KHD15839.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative flavoprotein
NECEvent2014_3_4_scaffold_96_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15500..19009
DNA (3510bp) protein (1170aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
nifJ2; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.-)
UPI0003D61FD3 related cluster n=1 Tax=unknown RepID=UPI0003D61FD3 rbh
NECEvent2014_3_4_scaffold_96_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19202..19555
DNA (354bp) protein (118aa)
UPI0003D59E5E related cluster n=1 Tax=unknown RepID=UPI0003D59E5E
Uncharacterized protein {ECO:0000313|EMBL:ETI89151.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_96_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20002..21195
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=2 Tax=Clostridium butyricum RepID=M8K2P2_CLOBU rbh
Aspartate aminotransferase {ECO:0000313|EMBL:KHD15836.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
class I and II aminotransferase
NECEvent2014_3_4_scaffold_96_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21367..22011
DNA (645bp) protein (215aa)
HAD hydrolase, family IB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YVN6_CLOBU rbh
HAD hydrolase, family IB {ECO:0000313|EMBL:ENZ31500.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD-superfamily subfamily IB hydrolase
NECEvent2014_3_4_scaffold_96_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22199..22924
DNA (726bp) protein (242aa)
UPI0003D61DAD related cluster n=1 Tax=unknown RepID=UPI0003D61DAD rbh
Enzyme of ilve/pabc family {ECO:0000313|EMBL:ETI89148.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
aminotransferase class IV
NECEvent2014_3_4_scaffold_96_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23025..24962
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHD4_CLOBU rbh
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KJZ87546.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
hypothetical protein
NECEvent2014_3_4_scaffold_96_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24976..25425
DNA (450bp) protein (150aa)
UPI0003D65DD8 related cluster n=1 Tax=unknown RepID=UPI0003D65DD8
Chemotaxis protein CheW {ECO:0000313|EMBL:ETI89146.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
cheW; chemotaxis protein chew
NECEvent2014_3_4_scaffold_96_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25435..25923
DNA (489bp) protein (163aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales
cheD2; putative chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=2 Tax=Clostridium butyricum RepID=M8K2N6_CLOBU rbh
NECEvent2014_3_4_scaffold_96_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25936..27081
DNA (1146bp) protein (382aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia;
cheB3; chemotaxis response regulator protein-glutamate methylesterase CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YVN0_CLOBU rbh
NECEvent2014_3_4_scaffold_96_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27091..27858
DNA (768bp) protein (256aa)
Chemotaxis protein methyltransferase, CheR {ECO:0000313|EMBL:EEP55485.1}; EC=2.1.1.80 {ECO:0000313|EMBL:EEP55485.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
cheR4; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
CheR methyltransferase, SAM binding domain n=2 Tax=Clostridium butyricum RepID=B1QXB4_CLOBU rbh
NECEvent2014_3_4_scaffold_96_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27893..29947
DNA (2055bp) protein (685aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
cheA5; chemotaxis protein CheA (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4T3_CLOBU rbh
NECEvent2014_3_4_scaffold_96_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30148..30747
DNA (600bp) protein (200aa)
cheC; CheY-P phosphatase CheC (EC:3.-.-.-)
Chemotaxis protein CheC n=2 Tax=Clostridium butyricum RepID=M8JG02_CLOBU rbh
Chemotaxis protein CheC--inhibitor of MCP methylation {ECO:0000313|EMBL:KJZ87577.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
NECEvent2014_3_4_scaffold_96_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30763..31122
DNA (360bp) protein (120aa)
Sporulation initiation phosphotransferase F n=4 Tax=Clostridium butyricum RepID=B1QXB1_CLOBU
Chemotaxis protein CheY {ECO:0000313|EMBL:EEP55206.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
cheY6; chemotaxis protein CheY
NECEvent2014_3_4_scaffold_96_24
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31250..31651
DNA (402bp) protein (134aa)
Chemotaxis signal transduction protein CheW n=3 Tax=Clostridium butyricum RepID=M8KAT8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ82820.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
chemotaxis signal transduction protein
NECEvent2014_3_4_scaffold_96_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31670..32668
DNA (999bp) protein (333aa)
UPI0003D61ADD related cluster n=1 Tax=unknown RepID=UPI0003D61ADD rbh
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KJZ87573.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
fliM; flagellar motor switch protein FliM
NECEvent2014_3_4_scaffold_96_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32652..33938
DNA (1287bp) protein (429aa)
Flagellar motor switch protein FliN n=2 Tax=Clostridium butyricum RepID=R0A4S9_CLOBU rbh
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ENZ31488.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 6
flagellar motor switch protein
NECEvent2014_3_4_scaffold_96_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34231..34500
DNA (270bp) protein (90aa)
Negative regulator of flagellin synthesis FlgM n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2M6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87593.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
anti-sigma-28 factor, FlgM
NECEvent2014_3_4_scaffold_96_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34510..34920
DNA (411bp) protein (137aa)
FlgN family protein n=2 Tax=Clostridium butyricum RepID=M8KAT2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97639.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
FlgN family protein
NECEvent2014_3_4_scaffold_96_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35103..36926
DNA (1824bp) protein (608aa)
Flagellar hook-associated protein FlgK n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFB2_CLOBU rbh
Beta 1,4 glucosyltransferase {ECO:0000313|EMBL:KJZ97624.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
flgK; flagellar hook-associated protein FlgK
NECEvent2014_3_4_scaffold_96_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36943..38274
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHB9_CLOBU rbh
Flagellar hookassociated protein FlgL {ECO:0000313|EMBL:KJZ82791.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
flgL; flagellar hook-associated protein 3
Displaying items 1-30 of 80 in total

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