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NECEvent2014_3_4_scaffold_338_12

Organism: NECEvent2014_3_4_Klebsiella_oxytoca_54_19_partial

partial RP 33 / 55 MC: 6 BSCG 30 / 51 ASCG 12 / 38 MC: 2
Location: comp(11548..12045)

Top 3 Functional Annotations

Value Algorithm Source
Regulator of sigma D n=4 Tax=Klebsiella oxytoca RepID=H3LYS1_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 165.0
  • Bit_score: 331
  • Evalue 4.00e-88
  • rbh
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebs similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 165.0
  • Bit_score: 331
  • Evalue 5.60e-88
anti-RNA polymerase sigma 70 factor similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 330
  • Evalue 2.50e-88

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGTTAAACCAGCTGGAAAACCTGACGGAACGTGTTGGAGGCAGCAATAAACTGGTCGATCGCTGGCTACAAGTACGTAAGCATTTGCTTGTGGCTTACTACAACCTGGTTGGCCTGAAGCCTGGCAAAGAATCATTTATGCGGCTTAATGAGAAAGCGCTGGATGATTTTTGCCAAAGCCTGGTGGACTACCTCTCCTCCGGCCATTTTAATATTTATGAACGCTTTATCGGCGAATTGGAAGGCGATACGCCACTTTTAGCCGCCACTAAGATTTATCCACAGCTGCAGGCTAATACCCAGCAGATCATGGATTATTACGATTCCTGCCTCGAAAACGCTATCGATCACGATAACTATCTTGAGTTCCAGCAGGCGCTATCGGACATCGGTGAAGCGCTGGAAGCCCGTTTTGCGCTGGAAGATTCGCTGATTGCCCTCGCCGTAGCCCACAGTCGAAAAGACAACGTTAGCGACAATATCGCGCCGACCGCTTGA
PROTEIN sequence
Length: 166
MLNQLENLTERVGGSNKLVDRWLQVRKHLLVAYYNLVGLKPGKESFMRLNEKALDDFCQSLVDYLSSGHFNIYERFIGELEGDTPLLAATKIYPQLQANTQQIMDYYDSCLENAIDHDNYLEFQQALSDIGEALEARFALEDSLIALAVAHSRKDNVSDNIAPTA*