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NECEvent2014_3_4_scaffold_945_2

Organism: NECEvent2014_3_4_Bifidobacterium_MSTE12-rel_58_13

near complete RP 51 / 55 MC: 4 BSCG 49 / 51 ASCG 13 / 38
Location: comp(3612..4163)

Top 3 Functional Annotations

Value Algorithm Source
DNA recombinase, putative n=1 Tax=Gardnerella vaginalis 75712 RepID=I4LDN5_GARVA similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 183.0
  • Bit_score: 347
  • Evalue 6.00e-93
  • rbh
DNA recombinase, putative {ECO:0000313|EMBL:EIK75075.1}; TaxID=698951 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 75712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 183.0
  • Bit_score: 347
  • Evalue 8.30e-93
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 183.0
  • Bit_score: 345
  • Evalue 1.10e-92

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Taxonomy

Gardnerella vaginalis → Gardnerella → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
AGAAGAATTGCTTGGAACAATCGAGGAGTGCATTCTGTTGTTTGGCGTTGTTGTACCAGATGGGAAAATGGTCCTAGTGCTTGTGATGCTCCGACAGTAAAAGAGGAAGAACTGCAGTCTGCTACAGTGAAAGCCATAAACAAGGTGTTTAGTATACCGGATGAAGTATTGGATACGTTGAATAACAATATTAGAGAAATTATCGCGGGCAACAACTTAAGGGAGATTGAAACGGTTGATAAAAAAATCGCGGACAAACAAGCGATACTACTAACCTTGCTTAAAGCTAAAAAAGACTACACGAAAATAGCTGATGAGATTGATGAACTTAAAGTTAAGAAACAGCAGCTTCTTATAGAAAAAGCAGGTCAAGAAGATGCTAAAAGACGAATCAGAGAAATGGAAGATTTTCTGAAAAATGAGCGTCACGATATTAGTGAATATGACGAGAAGCTGGTAAGAAAGTACATCAAGAAAATAAAAGTTTACGAGGACAAGTTCAGCGTAACTTTTAAATCAGAGATTAGTGTTGATGTTGAAAGGGCATCGTAA
PROTEIN sequence
Length: 184
RRIAWNNRGVHSVVWRCCTRWENGPSACDAPTVKEEELQSATVKAINKVFSIPDEVLDTLNNNIREIIAGNNLREIETVDKKIADKQAILLTLLKAKKDYTKIADEIDELKVKKQQLLIEKAGQEDAKRRIREMEDFLKNERHDISEYDEKLVRKYIKKIKVYEDKFSVTFKSEISVDVERAS*