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NECEvent2014_3_4_scaffold_948_1

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 1..2634

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 877.0
  • Bit_score: 1738
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 877.0
  • Bit_score: 1724
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXH1_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 877.0
  • Bit_score: 1738
  • Evalue 0.0

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2634
GAATATGTATTCTATCCTGTTTTAAAAGAAATACTAGATAATTATGCTGATGAAGAAAGTATAAAAGAAGAAATAAGAAAGAATATATATAGATTAATTCCTAAACATATTATAAGAGAAGATATATATGCTACCATAAATTATGAATTAGGATTAAGTTATGATATTGGTTATAAAGACGATATAGATCATTTAGGAAATAGAAGATTAAGATCAGTAGGAGAATTATTACAAAATCAATTTAGAATTGGTTTATCTAGAATGGAAAGAGTTGTTAAAGAAAGAATGACAATTCAAGATCAAGAAGTAATAACTCCTCAAGCTCTAATAAATATTAGACCTGTAGCAGCGTCCATTAAAGAATTTTTTGGTAGTTCACAATTATCACAATTTATGGATCAAACAAACCCTCTATCAGAATTAACACATAAAAGAAGGTTATCAGCTTTAGGACCAGGAGGACTTTCAAGAGAAAGGGCCGGTTTTGAAGTAAGAGACGTTCACCATTCACATTATGGAAGAATGTGTCCTATAGAAACTCCAGAAGGACCAAACATAGGGCTTATAAATTCTTTAGCTACTTTTGCTAAGGTTAATGAATATGGATTTATAGAAACACCATATAGAAGAATAGATCCTAAAAATAAAAGGGCTACAAATGACATAGTATATATGACAGCAGATGAAGAAGATTTATATGTAATAGCTAGATCAGATGAGCCAATTGATGAAAAGGGATATTTTTTAGATGATAAAGTTACAGTTAGAGCTAAAGAAGAAGTTTTAGTTGTTCCAGTTAGCGAAGTTGAGTATATGGATATATCACCAAGACAATTGGTTTCTGTTGCAACTGCAATGATACCATTCCTTGAAAATGATGATGCCAGCCGTGCACTTATGGGATCAAACATGCAACGTCAAGCAGTACCACTATTAAAGCCACAGGCTCCAATAGTTGGAACAGGTATAGAATATAAAGCTGCAACGGATTCAGGGGTTCTTCCAAAGGCTAAAAATGCAGGGACAGTAGTATATGTTTCAGCAGATGAAATAAGAGTAAGAAGAGATAGCGATGGAGGAATAGATAAATATAAATTATTAAAATTCAAAAGATCTAACCAAGGAACATGCATAAATCAAAGACCGATTGTTTCTAAAGGTGAAGTAGTAGCTAAGGAAACTCTATTAGCAGATGGACCTTCTACAGATCTTGGAGAAATAGCCCTTGGTAAAAATATTCTTATGGGCTTTATAACATGGGAAGGATACAATTACGAAGATGCCATGTTAATTTCAGAGCAATTAGTAAAAGAAGATGTGTTTACATCTATACACATAGAAGAATATGAAGCAGAAGCTAGGGATACAAAACTAGGACCAGAAGAGATAACAAGAGATATACCTAATGTAGGAGAAGAAGCGCTTAAAGATATAGATGAAAGAGGCATCATTAGAATTGGTGCTGAAGTTAGATCTGGAGATATATTAGTAGGTAAAGTTACTCCAAAGGGAGAAACTGAACTAACAGCTGAAGAAAGATTACTTCGTGCTATATTTGGAGAAAAAGCAAGAGAAGTTAGAGATACATCACTTAGAGTTCCACATGGAGAAGCAGGAATTATAGTTGATGTTAAAATATTTACAAGAGAAAATGGTGATGAATTACCACCAGGAGTTAATAAATTAGTTAGATGCTATATAGCTCAAAAGAGAAAAATATCTGTGGGAGATAAGATGGCAGGAAGACATGGTAATAAAGGGGTTATCTCTAGAGTTTTACCAGAAGAAGATATGCCATTCTTACCAGATGGAAGACCACTTCAAATATGCTTAAATCCTTTAGGGGTACCATCACGTATGAATATAGGTCAGGTATTAGAAGTACATTTAGGGTTAGCTGCTAGTAAATTAGGCTGGCATATAGCTACACCGGTTTTCGACGGGGCAATAGAATCTGATATAGTAGATTGTTTAAGAAAAGCTGGTTATTCTGAGGATGGAAAAACTGTTTTATATGATGGAAGAACAGGAGAACCATTTGATAATAGAGTAACAGTAGGATATATGTATATTTTAAAACTAGCTCATTTAGTTGATGATAAAATACATGCTAGATCTACAGGCCCATACTCACTAGTAACTCAACAACCTCTTGGAGGTAAAGCTCAGTTTGGAGGACAAAGATTTGGTGAGATGGAAGTTTGGGCTTTAGAAGCTTATGGAGCGGCCCATACCCTTCAAGAAATATTAACAGTTAAATCAGATGATGTAGTTGGAAGAGTTAAGACTTATGAAGCTATAGTAAAGGGAGAAAATATTCCAGAACCTGGAGTTCCTGAATCTTTCAAAGTTTTAATAAAAGAATTACAAGCATTATGTTTAGATGTTAAGGTATTGAATGATGATAATCAGGAAATAAAATTAAAGGAATCTGTGGATGAAGATGCAGACGAATTAGAAGTAAATATAGAAGGTACAGAAAATCAACCAGAAGAGAAAGAAGAAAAAGAAGAAGAAAAAGGAAAAGAAGATAGTGATGAATATGATGACTTAAGAGAAGAGGACGTAGAACCAGATTTAGAAGAGTTATCATTAGATGACTTAGATTTAGATGATTTTGGTGATGAACATTAA
PROTEIN sequence
Length: 878
EYVFYPVLKEILDNYADEESIKEEIRKNIYRLIPKHIIREDIYATINYELGLSYDIGYKDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVKERMTIQDQEVITPQALINIRPVAASIKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATFAKVNEYGFIETPYRRIDPKNKRATNDIVYMTADEEDLYVIARSDEPIDEKGYFLDDKVTVRAKEEVLVVPVSEVEYMDISPRQLVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKPQAPIVGTGIEYKAATDSGVLPKAKNAGTVVYVSADEIRVRRDSDGGIDKYKLLKFKRSNQGTCINQRPIVSKGEVVAKETLLADGPSTDLGEIALGKNILMGFITWEGYNYEDAMLISEQLVKEDVFTSIHIEEYEAEARDTKLGPEEITRDIPNVGEEALKDIDERGIIRIGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGIIVDVKIFTRENGDELPPGVNKLVRCYIAQKRKISVGDKMAGRHGNKGVISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGLAASKLGWHIATPVFDGAIESDIVDCLRKAGYSEDGKTVLYDGRTGEPFDNRVTVGYMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDVKVLNDDNQEIKLKESVDEDADELEVNIEGTENQPEEKEEKEEEKGKEDSDEYDDLREEDVEPDLEELSLDDLDLDDFGDEH*