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NECEvent2014_3_4_scaffold_948_2

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 2655..4142

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 496.0
  • Bit_score: 993
  • Evalue 2.70e-287
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 496.0
  • Bit_score: 993
  • Evalue 1.30e-286
DNA-directed RNA polymerase subunit beta' n=2 Tax=Clostridium botulinum A RepID=RPOC_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 496.0
  • Bit_score: 994
  • Evalue 4.30e-287

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1488
TTGTTTGAGTTAAATAATTTTGATGCTTTACAAATAGGTTTAGCTTCACCAGAAAAGATAAGAGAGTGGTCAAGAGGTGAAGTTAAAAAGCCAGAGACTATAAATTATAGAACACTAAAACCAGAAAGAGATGGTTTGTTCTGTGAAAGAATTTTTGGTCCTATGAAGGATTGGGAATGCCATTGTGGTAAATATAAAAGAATAAGATATAAGGGCATAGTTTGTGATAGATGCGGAGTAGAGGTTACTAAGGCCAAAGTAAGACGTGAGAGAATGGGGCATATAGAACTTGCTGCCCCTGTATCTCATATATGGTATTTCAAAGGGATTCCATCAAGAATGGGATTAATATTAGATATGTCTCCAAGAGCTTTAGAAAAAGTTTTATACTTTGCTTCGTATGTAGTATTAGATCCAAAAGAAACACCTCTTTTAAAGAAACAATTATTAAATGAAAAAGAGTATAGGGAATCTATAGACAAATATGGAGATGACAGCTTTGTCGCAGCAATGGGTGCAGAAGCTGTAAAGACTCTTTTAGACGAAATAGATTTAGAACAATCATCTATTGAACTTAAAGAAGAGTTAAAAACAAGTACAGGACAAAAGAAAATAAGAATAATAAGAAGGTTAGAGGTAGTAGAATCCTTTAGAAAATCAGGAAATAGACCTGATTGGATGGTTATAGATGTTATACCAGTAATTCCACCTGATTTAAGACCAATGGTTCAATTAGATGGAGGAAGATTCGCTACATCTGATTTAAATGATTTGTATAGAAGAGTTATAAATAGAAATAACAGATTAAAAAAATTGTTAGACTTAGGAGCTCCAGACATAATTGTAAGAAATGAAAAAAGAATGCTTCAAGAAGCAGTGGATGCTCTAATAGATAATGGTAGAAGAGGGAGACCAGTAACAGGACCAGGAAATAGACCTCTTAAATCATTATCAGATATGTTAAAGGGTAAACAAGGTAGATTTAGACAAAACTTACTAGGAAAGCGTGTTGACTATTCAGGCCGTTCAGTTATAGTTGTAGGACCAGAATTGAAAATGTACCAATGTGGTTTACCAAAAGAAATGGCTCTTGAATTATTTAAACCATTTGTTATGAAAAAACTTGTTCAAAATGGGTTAGCACATAACATAAAAAGCGCTAAGAGAATGGTAGAAAGAGTTCAACCTCAAGTTTGGGATGTATTAGAAGAAGTTATTTCTGATCATCCAGTATTATTAAACCGTGCCCCTACTCTTCACAGATTAGGAATTCAAGCTTTTCAACCTGTATTAGTAGAAGGAAGAGCAATTAAACTTCATCCACTTGTATGTACAGCTTATAATGCAGACTTCGATGGAGACCAAATGGCTGTTCACGTACCTTTATCAGTTGAAGCTCAAGCAGAGGCAAGATTCCTAATGCTAGCAGCACATAATATATTAAAACCATCTGATGGTAAACCAGTGTCTGTACCTACACAAGATATG
PROTEIN sequence
Length: 496
LFELNNFDALQIGLASPEKIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPMKDWECHCGKYKRIRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKVLYFASYVVLDPKETPLLKKQLLNEKEYRESIDKYGDDSFVAAMGAEAVKTLLDEIDLEQSSIELKEELKTSTGQKKIRIIRRLEVVESFRKSGNRPDWMVIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVQNGLAHNIKSAKRMVERVQPQVWDVLEEVISDHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAHNILKPSDGKPVSVPTQDM