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NECEvent2014_3_4_scaffold_1124_4

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 2054..2593

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TDP7_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 364
  • Evalue 6.00e-98
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDU38587.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 364
  • Evalue 8.40e-98
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 179.0
  • Bit_score: 360
  • Evalue 2.40e-97

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGTATAATTTACTTGAAAAATATAGAAATGGTGATATGAGTGCTTTAAATGAAATTATAGAAAATTTTAATCCACTTATATTGAAAGAGGCATCAAGATGGAGAATAGGATGTTATGAGTATGAAGATTTGGTGCAACATGGTTATCTTTCAGTTATAAAGGCTGTTAATATGTTTAAAGGTGAAGAAAGTAAGTTTGTTCCTTATTGTATAAATGCAATTAAAACAAATTATAAAGCTCTCTTAAAAGGAGAGATAAAGCACCATAGAGAAATACCAGATGAAAATATATTAAATAAAGGCAATGAATATATGTTTACCATAGAGGATGAAATAATAGCCTATGAAAAAACAAAGGAGATATATGAAGCAATAGATAAGCTTACACAAGAGGAAAAACAGGTTATAAATGATTTTTATATTAAAAATAATAGTCTTAATAAAGTAGCAGAGGACACAAATAAAACTTATAATTCCGTAAGATACACTAAAGATAAAGCAATAAAAAAACTGCAAAAAATACTTGAAGAGCATAGTTAA
PROTEIN sequence
Length: 180
MYNLLEKYRNGDMSALNEIIENFNPLILKEASRWRIGCYEYEDLVQHGYLSVIKAVNMFKGEESKFVPYCINAIKTNYKALLKGEIKHHREIPDENILNKGNEYMFTIEDEIIAYEKTKEIYEAIDKLTQEEKQVINDFYIKNNSLNKVAEDTNKTYNSVRYTKDKAIKKLQKILEEHS*