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NECEvent2014_3_4_scaffold_2429_1

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 251..1306

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 699
  • Evalue 2.80e-198
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 352.0
  • Bit_score: 698
  • Evalue 7.50e-199
DNA-directed RNA polymerase subunit beta n=4 Tax=Firmicutes RepID=G9EVM9_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 699
  • Evalue 2.00e-198

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1056
ATGAGCTTTTCTAGGCTTAAAGAGGTTGGGCAAATGCCAAATCTTATAGAAGTTCAGTTAGACTCATATGATTGGTTTTTAAAAGAAGGGTTACAAGAAGTTTTTGACGATATTAACCCGATTCAAGATTATACAGGTAATCTAAATTTAGAATTTGTAGGCTACAAACTAGATTTAGATAGTATTAAATACTCTGTTGAAGAGTGCAAAGAAAGAGATTCTACTTATGCAGCGCCATTAAAAGTAAAAGTTAGACTTCTAAATAAGGAAACTGGTGAAATAAAAGAACAAGAAGTTTTTATGGGAGATTTCCCTTTAATGACAGAACAAGGAACTTTTATAATAAACGGTGCAGAAAGAGTTATAGTAAGCCAATTAGTTAGATCACCAGGTGTTTATTATGACATGACTGTAGATAAAACAGGAAGCAAATTATTCTCAGCTACAGTTATACCTAACAGAGGTGCATGGCTAGAATATGAAACAGATTCAAATAACATAATATATGTAAGAATTGACAAAACACGAAAATTACCAATTACTATATTAGCAAGAGCATTGGGTTATGGAACAGATGCTGAAATAATAGAATTTTTCGGAGAAGATGAAAGATTAAAAGCCACAATAGAAAAAGATAATACAAAGACTAGAGAAGAAGCTTTACTTGAAATATATAAAAGATTAAGACCAGGTGAACCACCTACTGTGGATAGTGCAGAATCTTTAATTGAATCTTTATTCTTCGATGCTAAAAGATATGATTTATCAAGAGTTGGAAGATATAAATTTAATAAGAAATTAGCAATCCATCTAAGAATAACAAATCAAATTGCAGATCAAGATATAGTTAATCCACAAACAGGAGAAATCTTAGTACAAAAAGGTGAAAAAATAGATAAAGATAAGGCTATTGAAATACAGAACTGTGGTATTAACGAAGTATATATAAAAATAGATGATAAGTCATTTAAAGTAATTGGCAATCACTTTGTAGACATACATAGTTTGGTTTCATTTGATATAAGTGATTTAAATATTAAAGAATATGTATTCTAT
PROTEIN sequence
Length: 352
MSFSRLKEVGQMPNLIEVQLDSYDWFLKEGLQEVFDDINPIQDYTGNLNLEFVGYKLDLDSIKYSVEECKERDSTYAAPLKVKVRLLNKETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYDMTVDKTGSKLFSATVIPNRGAWLEYETDSNNIIYVRIDKTRKLPITILARALGYGTDAEIIEFFGEDERLKATIEKDNTKTREEALLEIYKRLRPGEPPTVDSAESLIESLFFDAKRYDLSRVGRYKFNKKLAIHLRITNQIADQDIVNPQTGEILVQKGEKIDKDKAIEIQNCGINEVYIKIDDKSFKVIGNHFVDIHSLVSFDISDLNIKEYVFY