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NECEvent2014_3_4_scaffold_1097_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2..1051

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Atopobium RepID=N2BTI6_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 349.0
  • Bit_score: 700
  • Evalue 6.90e-199
  • rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 349.0
  • Bit_score: 700
  • Evalue 9.70e-199
MiaB-like tRNA modifying protein YliG similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 354.0
  • Bit_score: 492
  • Evalue 1.10e-136

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
GTTGCTGCCTTTGTGCGTACCGATGAAGAGGATGGCATTGTTACGGTGGTTTCAAGCGTACTGGGCATTGATCAGCAGACCTGTGTTACTGATTATTCTACCTATGCGTTGCGTACCGTTGAAGGTGCAAGTGCGTTTGTCAAGATTTCTGATGGCTGCGATCGTTTTTGTACGTTTTGCGCCATTCCCTATATTCGTGGGCGGTATGCCTCAAGGTCCGCGCAGGAGATTTTGGATGAAGTTCATGCTCTGATGGAGGGTGGCGTTCGCGAAATAGTGCTCATTGGCCAAGATACCGGTGTTTGGGGTAAGGACATCAAGGGTTCTTATAACCTTGCATGGTTGTTGCGTCAGGTTGGCAAAGCTGTACGCCCGTATCAGGCTTGGGTTCGTGTTTTATACTTGCAGCCAGAGGGTATGACGGACGATCTTATCGCTGCTATTCGAGATACTCCTGAGGTTTTGCCTTATATTGATATTCCCATTCAGCACTGCTCGGGATCTGTTCTTAAGGCAATGAACCGCAGAGGTAACGCAAGTGAGTATCGCAAGGTGTTTGATCGTCTGCGTACAGAGATTCCCGGTATGGTTTTGCGCACCACGGCACTCACGGGGTTTCCAGGAGAAACCGAGCATGATTTCGATGAGCTCATGGGCTTTTTGTCCGAGCAGGAATTTGATTACACCTCCGTGTTCACCTACTCGGCAGAAGAGGGTACGCGCGCTGCAACGATGCCTGATCAGGTTGATGAGTCAGTTAAACTTGAGCGCACGCAGGCTCTGATTGATGTGGCTGAGCAACTTGGCTTTGCGGCCACTGCCAAACATGTGGGCGAGCGGGTGCCGGTTATTATTGACGGCATAGAAGAGGGCGACAAGGGCGCTGAGCTGATTGGTCATACCTGGTTCCAGGCACCGGATTGTGACGGTGCAGTGCATATTGCCTATGGTCAGGCGGCTGTGGGCGATGTAGTCATGTGTGATTTGGTTGATTCGTTTTGTTACGAGCTTGTTGGTGAGCTTGTGAACGCTGCAGATGAGGAAGCATAA
PROTEIN sequence
Length: 350
VAAFVRTDEEDGIVTVVSSVLGIDQQTCVTDYSTYALRTVEGASAFVKISDGCDRFCTFCAIPYIRGRYASRSAQEILDEVHALMEGGVREIVLIGQDTGVWGKDIKGSYNLAWLLRQVGKAVRPYQAWVRVLYLQPEGMTDDLIAAIRDTPEVLPYIDIPIQHCSGSVLKAMNRRGNASEYRKVFDRLRTEIPGMVLRTTALTGFPGETEHDFDELMGFLSEQEFDYTSVFTYSAEEGTRAATMPDQVDESVKLERTQALIDVAEQLGFAATAKHVGERVPVIIDGIEEGDKGAELIGHTWFQAPDCDGAVHIAYGQAAVGDVVMCDLVDSFCYELVGELVNAADEEA*