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NECEvent2014_3_4_scaffold_1804_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..1061)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 353.0
  • Bit_score: 695
  • Evalue 3.10e-197
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 345.0
  • Bit_score: 470
  • Evalue 4.30e-130
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Atopobium RepID=N2BTP6_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 353.0
  • Bit_score: 695
  • Evalue 2.20e-197
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGGTAATTACTCATGCTAAGCGCCACGACCGCGCGCAGACACAGCGCGTACAGGTTGGTAGCGTAGCAGTAGGTGGGGGAGCGCCCATCTGTGTTCAATCAATGACCAATACCAATACCGCAAATCCTCAAGCTACCTTAGCTCAGATTACTTGTTTAGCTGCAGCGGGCTGTGAAATTATTCGTGTTGCCTTGCCCAATAAAAATGCGATTGGTGGCTTTGAAGAGATCTGTGCTCGGTCCGAGCTGCCTGTAGTAGCAGATATTCATTTTGATCACAGGCTGGCCATTGAGGCCGCTCGTCGCGGAGCTTGTGCGTTGCGTATCAACCCTGGCAATATTGGTTCGTTTGCTAAGGTTGATGCCGTTATAGAAGCCGCTGCACAAGCTCATATTCCCATTCGTATTGGAGTAAATGCCGGTTCATTGGCCAAAGAATTTGATGTGCGTCAGGACATGACTCAGCCTCAAAAACTGGTTGCCTCATCTGAGTCATTTGTGAGCTATTTTGAGGAGCATGGCTTTACCGATATCGTTCTTTCTGCAAAAGCGCATGATGTTACTACTACCTTGGAAACGTACCGAGAACTCTCACGCGCCTTGCCTCATATTCCACTACATCTTGGGGTAACAGAGGCGGGTACTGCTTTCCAAGGCACTATCAAAAGTGCCATTGGTCTGGGCTGTTTGCTGGAACAGGGGATTGGCGATACCATGCGTGTATCGCTGACCGCAGATCCGGTAGAAGAGGTTAAAGTTGCTTGGGAAATTTTGGCAGCACTGGGTATACGCCGCCGTAATCCAGAGTTGGTAAGTTGTCCTACCTGCGGCCGTACCAAGATTAATCTCATTCCTATTGCAGAAGAGGTAGAACGTCGTCTACAAACCATTTCTGCACCTATTTCTGTTGCCGTTATGGGTTGTGAGGTTAACGGCCCTGGTGAGGCGCGCGATGCAGACATTGGCGTTGCTTGTAGCTGTGGACAAGGCTTAATCTTTGCCGGAGGAAAAACCCTGAGACGCGTACCAGAAGAGCAGATTATAGATGCACTGTTTGAG
PROTEIN sequence
Length: 353
MVITHAKRHDRAQTQRVQVGSVAVGGGAPICVQSMTNTNTANPQATLAQITCLAAAGCEIIRVALPNKNAIGGFEEICARSELPVVADIHFDHRLAIEAARRGACALRINPGNIGSFAKVDAVIEAAAQAHIPIRIGVNAGSLAKEFDVRQDMTQPQKLVASSESFVSYFEEHGFTDIVLSAKAHDVTTTLETYRELSRALPHIPLHLGVTEAGTAFQGTIKSAIGLGCLLEQGIGDTMRVSLTADPVEEVKVAWEILAALGIRRRNPELVSCPTCGRTKINLIPIAEEVERRLQTISAPISVAVMGCEVNGPGEARDADIGVACSCGQGLIFAGGKTLRRVPEEQIIDALFE