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NECEvent2014_3_4_scaffold_2847_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(205..1035)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, delta prime subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 277.0
  • Bit_score: 259
  • Evalue 1.50e-66
DNA polymerase III, delta' subunit n=2 Tax=Atopobium PF7_9ACTN">RepID=N2BPF7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 276.0
  • Bit_score: 519
  • Evalue 2.30e-144
  • rbh
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EMZ40398.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 276.0
  • Bit_score: 519
  • Evalue 3.20e-144

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 831
CTTACACCCGTGCGGGCAAAAACCAAGGTATACATCATTCAGCGTGCAGATATGCTGCGCGGCACAAGTGCAAATGCCTTACTTAAGACCATTGAGGAGCCTCCGGCGCAGGTAGTCTTTATTCTTATTGCGCGTACCGTGGATAACGTGCTGCCCACCTTGGTTTCTCGCTGTCAGACGGTACCCTTTAGCGTGCTATCTTCACAGGCAGGTGTTCGCGCGGTGGAGCTGGCAACGGGCGTAGGAGATTATCGTGCGCAGATAGCTCTTGCAATAACTGGCACACCACAGCAGGCCGAGCAGTATCTTTTATCGGCCACACGCCAAGAAATTCGGGCCCAAGTCATACGTGCTTTTAGTGAATTGGCTCATGCAGACTCGTGGGATATTTTGCAAGCTGCTCAGCGGATTACCTACGCTATCACACCGCCTAAAAAGAGCAAAAAGAAGGTAGATACCGCGCAGTTGAGTGCAGAAGAGCAGCAAGAAGCGGCGCTTGTAGAGCAGTATCTTTCTAAGAAAGCACAAAGCGAACTGGAAGCCATCAAAAAACGCGAGGCAACCGCGAGAGATCGTTCGGGTATGATAGAGGCTCTAGCTGCAGCAAAATCGCTTTTGCGTGATGTGCTTATGTACTGTGAGCAAGTGGATGTGGCGCCTGTCAATGCGGACCATAGTGATGTTATTCAACGCATAGGGGCGCATACCACTACTGCAGGAGTGATTCGTGCGCTCGAAGCTGTTGATGTAGCAATTGCTGACATCAACCACAATGTAACACCCCAGCTGGCTTTGGAGGTCATGCTGTTATCTGCCAAGGAGGCACTGTAA
PROTEIN sequence
Length: 277
LTPVRAKTKVYIIQRADMLRGTSANALLKTIEEPPAQVVFILIARTVDNVLPTLVSRCQTVPFSVLSSQAGVRAVELATGVGDYRAQIALAITGTPQQAEQYLLSATRQEIRAQVIRAFSELAHADSWDILQAAQRITYAITPPKKSKKKVDTAQLSAEEQQEAALVEQYLSKKAQSELEAIKKREATARDRSGMIEALAAAKSLLRDVLMYCEQVDVAPVNADHSDVIQRIGAHTTTAGVIRALEAVDVAIADINHNVTPQLALEVMLLSAKEAL*