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NECEvent2014_3_4_scaffold_731_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(2..628)

Top 3 Functional Annotations

Value Algorithm Source
DNA excision repair protein ERCC-3 {ECO:0000313|EMBL:ERJ12308.1}; EC=3.6.4.12 {ECO:0000313|EMBL:ERJ12308.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 208.0
  • Bit_score: 192
  • Evalue 6.70e-46
DNA excision repair protein ERCC-3 n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EB28_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 208.0
  • Bit_score: 192
  • Evalue 4.80e-46
type III restriction enzyme, res subunit similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 207.0
  • Bit_score: 154
  • Evalue 3.10e-35

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Taxonomy

Haloplasma contractile → Haloplasma → Haloplasmatales → Bacteria

Sequences

DNA sequence
Length: 627
ATGCAGTTGCGTGACCTGCATTATAAGCATCCGTTTCGGTCTTACCAACAGCGCATCCTTGATGCGTTTTCTTCATATCAAGCCGATAAAGCCATTAATATAGTTGCAGCTCCCGGCAGTGGAAAAACGATTCTTGGACTGGAGTTGATCCGCCGCCTTGGAAAGCCAGCTCTTATTTTGTCTCCATCTCTTGCCATACGCCAACAATGGGGAGAACGCTTTGCAGATGGCTTCCTTACACAAGACAGCCAGGAGCACGATTTTGTCTCGTATTCCCTGCTCGACCCAAAGATCATAACCTCTATTACATATCAATCCTTACATGCGGCATGGGTTCAAAAAGCCTCTGCCGACAAAACAAAGGATGCAGATACCGCCAACAAGGCCGATGAGCAAGATGAGCAAGTGCTCCAGGAAGAGGACAATAAACAAGCCCAGCCAGATCTCCAAGAAGAGCGTGTGGAGGATTTTACTAATTTTGACGTTTTAGCTGCTGTTGCTCAGGCTGGTATTACCACCATTTGCCTTGATGAGGCCCACCATCTTCGCGCGGAGTGGCAGCGAGCGCTGGAGGCGTTCATAAAAGCGCTTAAGGGACAGGTATTTGTCATTTCCCTCACAGCCACG
PROTEIN sequence
Length: 209
MQLRDLHYKHPFRSYQQRILDAFSSYQADKAINIVAAPGSGKTILGLELIRRLGKPALILSPSLAIRQQWGERFADGFLTQDSQEHDFVSYSLLDPKIITSITYQSLHAAWVQKASADKTKDADTANKADEQDEQVLQEEDNKQAQPDLQEERVEDFTNFDVLAAVAQAGITTICLDEAHHLRAEWQRALEAFIKALKGQVFVISLTAT