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NECEvent2014_3_4_scaffold_841_4

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(3202..3486)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, lactose/cellobiose-specific IIB subunit n=2 Tax=Atopobium RepID=U2VST9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 188
  • Evalue 2.40e-45
Uncharacterized protein {ECO:0000313|EMBL:EMZ40494.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 188
  • Evalue 3.30e-45
PTS system lactose/cellobiose-specific transporter subunit IIB similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 94.0
  • Bit_score: 128
  • Evalue 8.20e-28

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAAGATTTGTGCGGTTTGCGGTTTTGGAGTTGGCTCAAGCGTCATTGCCAAGATGAATATTGAAAGCATCCTTTCTCAGGAAGGAAAGGGTGATATTGAGGTGGAAACCGTTGACCTTGGAAGTGTAATGGGTGTTGATGCTGACGTCTTCTTTACCACTCATGAGCTATTTGACAATTTTCCAGACGAGCTCAAGCCTAAAACCGTAGTTTTGGACAATTTTGTTGACCTGGATTCAATTAAGGAAAAGCTCGACATGAAGTTGTCAGAATTTGGCGTTTAG
PROTEIN sequence
Length: 95
MKICAVCGFGVGSSVIAKMNIESILSQEGKGDIEVETVDLGSVMGVDADVFFTTHELFDNFPDELKPKTVVLDNFVDLDSIKEKLDMKLSEFGV*