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NECEvent2014_3_4_scaffold_2475_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2..307

Top 3 Functional Annotations

Value Algorithm Source
PTS system, Fru family, IIC component n=2 Tax=Atopobium RepID=N2BUH2_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 200
  • Evalue 1.10e-48
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EMZ40509.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 200
  • Evalue 1.60e-48
PTS system Fru family transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 141
  • Evalue 1.70e-31

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATTCCCATTGCAATGAATGACCTTATTCGCACCGTTTTTTGTACGGCACTTGGTGATGGTGTCTGTGGTGCCATTGCGTTTTCCATGGGCGTAGAAAGCCAGGTTCCTTCAGGCGGTGTGTTTGTAATTCCGGCAATGGCAAATCCTCTGTGGGCAGTCATTGCACTACTGGCTGGTTCTTGTGTTACCGCGGTTCTTCTCGTTCTTCTCAAGAAGCCCTTAACCGCAGAAGAGCAAAATGACCTGGATCTTCCTGAGGATGACACCGAGCAGGAAGTTGATCTGTCCTCCTTCTCTCTTTCGTAA
PROTEIN sequence
Length: 102
IPIAMNDLIRTVFCTALGDGVCGAIAFSMGVESQVPSGGVFVIPAMANPLWAVIALLAGSCVTAVLLVLLKKPLTAEEQNDLDLPEDDTEQEVDLSSFSLS*