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NECEvent2014_3_4_scaffold_2615_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 3..518

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=997872 species="Bacteria; Ac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 331
  • Evalue 9.90e-88
Transcription-repair-coupling factor n=1 Tax=Atopobium minutum 10063974 RepID=N2BQK6_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 331
  • Evalue 7.00e-88
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 170.0
  • Bit_score: 223
  • Evalue 4.50e-56

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTAGCAGAGGCGCGCGGCGAGTCTGCGGATTTGCCTCCCGTAGAAGTGACCATTAACCTCCAGGCAGATTTTTACTTGGCCGATGAGTACATCCCCGATGTAGATAAACGCGTGCTGGTGTACCGCCAGCTGGCGGGCGCCATGGAACTTTCCGAGATAGACGCGCTTGAGCAGGATGTAGAGCAGCGCTATGGAACGCTTCCTTTGGCTGGCCGCAATCTGTTTGATCGTGCCCGCATTCGCATTCGTGCCCAACGCTTGGGCGTGAGTTCAGTTGCTCTTACAGAGGGTCGTTTGGTGTATGTGGGACTTGAAGTTCCTCGCGATACAAGCCTCAAGTTGCGTGAGCGAGGTGCGCTGGTATATCCCAAGACCAAGAAACTGGCGTATCCTTTTCATAGACAACGTGGTACGTTTGCTAGAAGTGCAGCTACTTCTGCGACGCGTAGCATAGAAGAGCTACTTCCCGCTGCCTTGGGTGTGCTGGAAGAAGTTGGCGGAGACGACGAAGAGTAA
PROTEIN sequence
Length: 172
VAEARGESADLPPVEVTINLQADFYLADEYIPDVDKRVLVYRQLAGAMELSEIDALEQDVEQRYGTLPLAGRNLFDRARIRIRAQRLGVSSVALTEGRLVYVGLEVPRDTSLKLRERGALVYPKTKKLAYPFHRQRGTFARSAATSATRSIEELLPAALGVLEEVGGDDEE*