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NECEvent2014_3_4_scaffold_1276_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 1928..2821

Top 3 Functional Annotations

Value Algorithm Source
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=997872 species="Bacteria; Actin similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 594
  • Evalue 8.30e-167
glutamate racemase (EC:5.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 291.0
  • Bit_score: 291
  • Evalue 2.30e-76
Glutamate racemase n=2 Tax=Atopobium RepID=N2C0S8_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 594
  • Evalue 5.90e-167
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGTGCAACCTAGTTTTCCTATTGGTGTGTTTGATTCTGGACTTGGCGGTCTGACGGTTGCTCGTGCTCTGTCGGAGTATATGCCGTATGAATCTATTTGGTATGTGGGAGATACCAAGCGTTGCCCCTATGGTGTGCGTAATCAGGCAGAAGTAAAAAACTTTGCTCTGCAGATAGGCAAGTGGCTTGCTAAGCATGACGTCAAGCTTATGGTCATTGCCTGCAACACGGCTACAGCAGCAGCCTTCCATGCCTTACAAGAGCAGCTGCCCCTTCCCGTTATAGGTGTGATTGAACCTGGGGCGTCTGCAGCGTGTAGGGTTTCTCGCTCGCGTAACATTGGTGTGCTGGCTACGCAGGGAACTGTTACTTCCAATTCTTATGCGCAGGCGCTTCATGATTTGGATGCGACTATAAAGGTTACGCAGTGTGCTACGCCGCGCTTTGTACAAACGGTAGAAAGCGAGCTTGCACGTACCAACCATCTTTATCAGGGCTGGAAGCTTAATCCAGAGATTTTTGACACACCTGAGGTTCATGCCATGGTGCGTGAGGATATCTCACCCCTTCTTGATAAGGACATTGATACCGTGGTGTTGGGGTGTACGCATTTTCCTTTACTGTCTGCTCAGATTCAAGCGGTGCTGGGTGAGGACGTACATCTCGTAAATCCTGCCGACCAGACCGCGCGAGAGGTAAAGCAAACGCTTGAGCAGCTGGGTATGTTGGCAAGTCCTTCGGATGTGATTCGTGGCGTGCATGCAGAGCCTGCATATCGCTTTGCTACTACGTCGGACAACATCACCTCTTTTGCGGTGGCTGGTACTTTTGTTTTTGGCCACGACCTGGATTCTGTCGAGCATATTGAGCTTTCTGAGCTGGAAAATCTATAG
PROTEIN sequence
Length: 298
MVQPSFPIGVFDSGLGGLTVARALSEYMPYESIWYVGDTKRCPYGVRNQAEVKNFALQIGKWLAKHDVKLMVIACNTATAAAFHALQEQLPLPVIGVIEPGASAACRVSRSRNIGVLATQGTVTSNSYAQALHDLDATIKVTQCATPRFVQTVESELARTNHLYQGWKLNPEIFDTPEVHAMVREDISPLLDKDIDTVVLGCTHFPLLSAQIQAVLGEDVHLVNPADQTAREVKQTLEQLGMLASPSDVIRGVHAEPAYRFATTSDNITSFAVAGTFVFGHDLDSVEHIELSELENL*