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NECEvent2014_3_4_scaffold_1386_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1237..1731)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, fructose subfamily, IIA component n=2 Tax=Atopobium RepID=N2BJX0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 164.0
  • Bit_score: 320
  • Evalue 9.10e-85
  • rbh
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:EMZ40511.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopob similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 164.0
  • Bit_score: 319
  • Evalue 3.70e-84
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 156.0
  • Bit_score: 206
  • Evalue 7.10e-51

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GTGGCTGGTTTCAGTGACACAGATTTTGATATAACACGTGTGATAGACAAAAACCTTATTGCGCTTAATCTAGAGGCTAAAGATAAGGAAGACATGCTTCGACAGCTTATTTCCTTACTTGATGAGCACGGTAGGTTAAACAACCCCGAGGAATTCTATGCCGATGTACTATGGCGTGAGAAAGAGGGCCAAACGGGAATTGGTCTAGGTGTCGCTATTCCTCACGGAAAGTCTTCAAGCGTTAACCAAACTTCTCTTGCTATTGGAACTACCGCTAATCCCATTGTGTGGGAGTCGATAGATGATAAGCCTGTCTCGATAGTAATTTTATTTGCAGTAACCCAGGCTGATTCAGATACGGTGCATTTAAAGCTTTTGCAGCATGTTGCTAAATTATTGGTATATGAAAGCTTTATTGAAAAGCTTTATGCAGTTAAGACAGCAAATGAAATGCTCGAGCTTTTGCAATCAAATCCTGACGACTATAGCGACTAA
PROTEIN sequence
Length: 165
VAGFSDTDFDITRVIDKNLIALNLEAKDKEDMLRQLISLLDEHGRLNNPEEFYADVLWREKEGQTGIGLGVAIPHGKSSSVNQTSLAIGTTANPIVWESIDDKPVSIVILFAVTQADSDTVHLKLLQHVAKLLVYESFIEKLYAVKTANEMLELLQSNPDDYSD*