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NECEvent2014_3_5_scaffold_354_15

Organism: NECEvent2014_3_5_Clostridium_butyricum_29_29

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 2
Location: 12872..13735

Top 3 Functional Annotations

Value Algorithm Source
Putrescine transport system permease protein PotH n=2 Tax=Clostridium butyricum RepID=B1QUC2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 566
  • Evalue 1.70e-158
  • rbh
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:EEP53695.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 566
  • Evalue 2.30e-158
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 287.0
  • Bit_score: 480
  • Evalue 4.40e-133

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAAATTAAAAAAGAAATTAAATCTTCCCCTGATTACAATGGTAGGGCCTGTGGCTCTTTGGATGATATTGTTTGTTGCAATACCTTTTATATATGTTTTTGTAATAAGTTTTATGAAAAAAGGAACGTATGGTGGTGTTAATTTTGGATTTACATTGAATAATTTTATTCAAGTATTTAATCCTATGTATTTAAAAGTTTTTGGAGTATCAATAGTACTATCAGCAGTTACAACAATAATATGTATATTGATTGCATACCCATTTACATATTATGTGGCTCAGAAAACAACTATAACCAAAACTGTTTTTATGTCAATGGTTACAGTACCATTTTTAGTTAGTTCCTTAATAAGGTTATTTAGCTGGATTACATTACTTCGTAAAGACGGAATAATAAATTCCTTTCTAATGAAAATAGGAGTAATACATGAACCTTTGCAATTAGTATACAACACGACAGGAACAATAATAGGGCTTGTATATATGCTTCTTCCATTTATGATATTGCCTTTATATAGTTCTATAGAAAAGCTTGATAAATCTCTTCTTGAAGCATGTTGTGATTTAGGGGCAAAACCAGCAAAGGCATTTTTGAAAGTTACACTTCCATTAACTATGCCTGGTATATTTGCAGGAACAATAATGGTGTTTATTCCAGCTCTAGGGTTATTTTTTGTAACAGATCTTCTAGGGGGAAGCAACACTCAAGTGATTGGTAATATAATAAGAGACCAGTTTATTACAGCTAGAAATTGGCCTTTAGGTGCAGCATTATCAATATTCTTAATAGTAATAACATTAATTTTAGTATGGCTGTATCAGAAATCTGGTGGAGATATGGACGAATTAGGAGGGTTTTAG
PROTEIN sequence
Length: 288
MKLKKKLNLPLITMVGPVALWMILFVAIPFIYVFVISFMKKGTYGGVNFGFTLNNFIQVFNPMYLKVFGVSIVLSAVTTIICILIAYPFTYYVAQKTTITKTVFMSMVTVPFLVSSLIRLFSWITLLRKDGIINSFLMKIGVIHEPLQLVYNTTGTIIGLVYMLLPFMILPLYSSIEKLDKSLLEACCDLGAKPAKAFLKVTLPLTMPGIFAGTIMVFIPALGLFFVTDLLGGSNTQVIGNIIRDQFITARNWPLGAALSIFLIVITLILVWLYQKSGGDMDELGGF*