ggKbase home page

NECEvent2014_3_5_scaffold_607_6

Organism: NECEvent2014_3_5_Clostridium_butyricum_29_29

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 2
Location: 6609..7493

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter periplasmic subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VIU6_CLOSH similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 294.0
  • Bit_score: 405
  • Evalue 5.00e-110
  • rbh
ABC transporter permease {ECO:0000313|EMBL:KGK88173.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 294.0
  • Bit_score: 459
  • Evalue 4.10e-126
livH; high-affinity branched-chain amino acid ABC transporter system permease protein LivH similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 294.0
  • Bit_score: 405
  • Evalue 1.40e-110
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGGAACAACTATTACAGCAATTAATAAATGGAATATCACTTGGAAGCATATATGCTCTAATAGCATTAGGTTATACCATGGTATATGGAATAATAAATTTAATTAATTTTGCCCATGGTGATATTTATATGATAGGAGCATATGTAGGATTTGCCTTAACAACCTTTCTAGGATTAGGTTTTTTTCCTTCATTGCTAATTTCAATGTTAGTTTGTAGTGTTCTTGGAATCATAATAGAAAAAATAGCATATAAGCCTATAAGAAATTCTACAAGGATTGCTGCTCTTATTACTGCTATATCTGTATCACTATTTTTAGAATATACCATGGTGTATTTTGTAAAACCAGATACAAGAACATTTCCAGAAGTGTTAAAAAGTAAAATACTGACTCTGTTTGACGGAAGAGTTATATTAGATACAAAAAATATTTATATTATTTTAATAACTATTGCATTGATGATTGGACTTCAATATATAGTTCATAGAACTAAAATAGGTAAGGCAATGAGAGCTGTTTCTCTAGATAAAGATGCTGCTGAACTTATGGGAGTAGATGTAAACAAAACCATATCAGCTACATTTGCTCTTGGGTCTGCATTAGCAGGGGCCGCTGGAGTTTTGGTTGGAGTCTATTATAATACTATAAATCCTCTAATGGGAACAGTGCCAGGATTAAAGGCATTTGTTGCGGCAGTATTAGGAGGAATAGGCATTATTCCTGGAGCAGTATTTGGAGGGTTCTTCCTTGGCATGACAGAAACTCTTGTCTCTGCTTATGGAGGGTCAGTATTCAAAGATGCTGTTGCCTTTTCAATACTTATTATAGTCTTATTATTTAAGCCTAATGGACTTCTAGGAAAGACTATAAAGGAAAAGGTATAG
PROTEIN sequence
Length: 295
MEQLLQQLINGISLGSIYALIALGYTMVYGIINLINFAHGDIYMIGAYVGFALTTFLGLGFFPSLLISMLVCSVLGIIIEKIAYKPIRNSTRIAALITAISVSLFLEYTMVYFVKPDTRTFPEVLKSKILTLFDGRVILDTKNIYIILITIALMIGLQYIVHRTKIGKAMRAVSLDKDAAELMGVDVNKTISATFALGSALAGAAGVLVGVYYNTINPLMGTVPGLKAFVAAVLGGIGIIPGAVFGGFFLGMTETLVSAYGGSVFKDAVAFSILIIVLLFKPNGLLGKTIKEKV*