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NECEvent2014_3_5_scaffold_104

Alias: 173_003_scaffold_104

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_104_25
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26122..27282)
DNA (1161bp) protein (387aa)
Predicted aminotransferase n=2 Tax=Clostridium RepID=D8GPA9_CLOLD rbh
aminotransferase
Aminotransferase {ECO:0000313|EMBL:AKA69481.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
NECEvent2014_3_5_scaffold_104_26
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27464..28231
DNA (768bp) protein (256aa)
Transcriptional regulator, IclR family n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RRF4_9CLOT
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AGY75157.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoeth
NECEvent2014_3_5_scaffold_104_27
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28344..29303
DNA (960bp) protein (320aa)
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000255|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000255|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000255|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000255|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RNZ_ALKOO rbh
NECEvent2014_3_5_scaffold_104_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29381..30226
DNA (846bp) protein (282aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium ultunense Esp RepID=M1ZMA2_9CLOT rbh
NECEvent2014_3_5_scaffold_104_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30246..31493
DNA (1248bp) protein (416aa)
Sodium:dicarboxylate symporter n=1 Tax=Clostridium ultunense Esp RepID=M1ZI25_9CLOT rbh
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:CCQ98596.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;
sodium:dicarboxylate symporter
NECEvent2014_3_5_scaffold_104_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31756..32961
DNA (1206bp) protein (402aa)
Sodium/hydrogen exchanger n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIJ5_ALKOO rbh
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:KIE47948.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argen
sodium/hydrogen exchanger
NECEvent2014_3_5_scaffold_104_31
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32984..33325
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIJ6_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:KIE47930.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
hypothetical protein
NECEvent2014_3_5_scaffold_104_32
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33367..33684
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIC2_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53701.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (st
NECEvent2014_3_5_scaffold_104_33
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33724..34575)
DNA (852bp) protein (284aa)
Peptidase S41 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPD4_ALKMQ
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ABR48052.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;
NECEvent2014_3_5_scaffold_104_34
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34612..35187)
DNA (576bp) protein (192aa)
Peptidase S41 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPD4_ALKMQ
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ABR48052.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;
NECEvent2014_3_5_scaffold_104_35
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35412..36221
DNA (810bp) protein (270aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D763_9FIRM rbh
NECEvent2014_3_5_scaffold_104_36
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36322..37035
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KVM8_CLOBM
Uncharacterized protein {ECO:0000313|EMBL:KGK87575.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
NECEvent2014_3_5_scaffold_104_37
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37165..37527
DNA (363bp) protein (121aa)
Uncharacterized HTH-type transcriptional regulator YhcF n=1 Tax=Clostridium ultunense Esp RepID=M1ZL87_9CLOT
Uncharacterized HTH-type transcriptional regulator YhcF {ECO:0000313|EMBL:CCQ96772.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
GntR family transcriptional regulator
NECEvent2014_3_5_scaffold_104_38
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37527..38225
DNA (699bp) protein (233aa)
ABC transporter related protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZF90_9CLOT rbh
ABC transporter related protein {ECO:0000313|EMBL:CCQ96773.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.
yhcG; ABC transporter ATP-binding protein
NECEvent2014_3_5_scaffold_104_39
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38236..39084
DNA (849bp) protein (283aa)
Membrane protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZEQ4_9CLOT
Membrane protein {ECO:0000313|EMBL:CCQ96774.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
membrane protein
NECEvent2014_3_5_scaffold_104_40
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39261..40259
DNA (999bp) protein (333aa)
3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000313|EMBL:EMS73901.1}; EC=2.3.1.180 {ECO:0000313|EMBL:EMS73901.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Rumino
3-oxoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Clostridium termitidis CT1112 RepID=S0FUA8_9CLOT
3-oxoacyl-ACP synthase
NECEvent2014_3_5_scaffold_104_41
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40286..40675)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bacillus coagulans 36D1 RepID=G2TMX3_BACCO
Uncharacterized protein {ECO:0000313|EMBL:KEZ87052.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_3_5_scaffold_104_42
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40740..42926)
DNA (2187bp) protein (729aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00036E6E73 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGP73590.1}; TaxID=1385514 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
hypothetical protein
NECEvent2014_3_5_scaffold_104_43
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

43067..44230
DNA (1164bp) protein (388aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH69_THET1
Uncharacterized protein {ECO:0000313|EMBL:EXJ23245.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
hypothetical protein
NECEvent2014_3_5_scaffold_104_44
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

44220..45635
DNA (1416bp) protein (472aa)
Glycosyl transferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZ84_9CLOT rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EXJ23244.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalib
glycosyl transferase family protein
NECEvent2014_3_5_scaffold_104_45
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45705..46934
DNA (1230bp) protein (410aa)
Peptidase, M48 family {ECO:0000313|EMBL:CCQ96777.1}; EC=3.4.24.84 {ECO:0000313|EMBL:CCQ96777.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Peptidase, M48 family n=1 Tax=Clostridium ultunense Esp RepID=M1ZL88_9CLOT rbh
peptidase M48 Ste24p
NECEvent2014_3_5_scaffold_104_46
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47010..47399
DNA (390bp) protein (130aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium ultunense Esp RepID=M1ZER1_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCQ96779.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
GntR family transcriptional regulator
NECEvent2014_3_5_scaffold_104_47
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47433..48530
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z1R6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96780.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
protein of unknown function DUF1648
NECEvent2014_3_5_scaffold_104_48
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49115..50203
DNA (1089bp) protein (363aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VSX1_CLOBI rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidig
NECEvent2014_3_5_scaffold_104_49
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50210..50863
DNA (654bp) protein (218aa)
ribE; riboflavin synthase, subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKB3_9CLOT
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EKY28434.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
NECEvent2014_3_5_scaffold_104_50
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50876..52075
DNA (1200bp) protein (400aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL51_9CLOT rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
GTP cyclohydrolase II rbh
NECEvent2014_3_5_scaffold_104_51
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52092..52553
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKH4_9CLOT
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
NECEvent2014_3_5_scaffold_104_52
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52558..53220
DNA (663bp) protein (221aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLI4_9CLOT
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EKY28437.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DS
putative hydrolase MhqD
NECEvent2014_3_5_scaffold_104_53
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53249..53557)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ96781.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_5_scaffold_104_54
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53634..53846)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZA34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95081.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Displaying items 31-60 of 94 in total

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