ggKbase home page

NECEvent2014_3_5_scaffold_1251_2

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 1679..2956

Top 3 Functional Annotations

Value Algorithm Source
RbsC1 Ribose transport system permease protein rbsC n=4 Tax=Bifidobacterium dentium RepID=D2Q8V4_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 790
  • Evalue 8.00e-226
  • rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFM41047.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 425.0
  • Bit_score: 821
  • Evalue 4.60e-235
rbsC1; ribose transporter permease rbsC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 790
  • Evalue 2.30e-226
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACGGGCTTGAACCGTGACTTGAACCGTGAAAGGAAACGCATTCAAATGTCAGCTGCAAATTCCGCCGCCGTCAAGAAGGGCGACGACAAGGTAGAAACCCAGTCCCTCAAGGAGCTGCTGCTCGGTAACGCTCGCTCCTACGGCATCTTCTTCGCGCTGGTTGTGGTGATCATCGTATTCCAGATCCTCACCGGCGGCCGCCTGCTCAATCCGAACAACGTGGTCGCGCTGTTCCAGCAGAACGCCTACGTGCTCATCGCCGCGATAGGTATGCTGATGGTCATCATCGCCACCCACATCGATCTGTCCGTCGGCTCGGTGGTCGCCTTCATCGGCGGCGTCGGCGCACTGGCCATGAAGAATTGGGGTCTGAACTGGTTCCTCGCCATCGTGCTGATGATCGTCATCGGTCTGGCCATCGGCGCATGGCACGGCTTCTGGGTCGCCTACGTCGGCGTTCCGGGCTTCGTCACCACCTTGGGCGGCATGCTGATCTTCCGTGGCCTCGCCACCGTCGTCGCCGGCGAATCCATTCCGGTCTCCGATCCGACCTTCCGCGCCATCTCCAAGGATTACCTGCCGAACGTCCTCGGATTCTGGGGAGACTTCTCCAGCAACGCAATCATCGTGGGAGTCGTCGCCATTGTGCTCGTCATCTGGATGCAGTTGCACAAGCGCAACAATGCCATCAAGAACGGCCTTCCGGTCCAGCCGATGAGCTTCGTGGTCCTCAAGCTGGTCATCGCCGTCGCGGCAATCGCCTACGTGACCTACCTGCTGGCCTGCTCCGGCAACGCCACCCAAGGCGGCATCCCGATCGTGATGCTCATCATCGGCGTGCTCATCGGCGTGTACTGGTTCGCACTGAACCGCACCGTCTACGGTCGTAACGTCTACGCCGTCGGCGGCAACCGCAAGGCGGCCATCCTTTCCGGCATCGACACCAAGGCGACCGATTTCAAGATCTTCCTGAACATGGGCTTCCTGACCTCCATCGCAGCCGTCATCACCCTGTCCCGACTGGCATCCGCAACCGCGCAGACCGGTATGGAGTTCGAGATGGACGCCATCGCGGCCTGCTTCATCGGCGGCACTGCGGTCACCGGCGGCATCGGCACCATCCCGGGCGCCATGGTCGGCGCTCTGATCATGGGCGTGCTGAACCAGGGCCTGTCCATCATGGGCGTTGACGCAGCCTGGGTCAAGACCATCAAGGGCCTGGTCGTGATCGCGGCTGTGGCCTACGATCTGGTCAGCAAGCGCAAGAAGGGCTGA
PROTEIN sequence
Length: 426
MTGLNRDLNRERKRIQMSAANSAAVKKGDDKVETQSLKELLLGNARSYGIFFALVVVIIVFQILTGGRLLNPNNVVALFQQNAYVLIAAIGMLMVIIATHIDLSVGSVVAFIGGVGALAMKNWGLNWFLAIVLMIVIGLAIGAWHGFWVAYVGVPGFVTTLGGMLIFRGLATVVAGESIPVSDPTFRAISKDYLPNVLGFWGDFSSNAIIVGVVAIVLVIWMQLHKRNNAIKNGLPVQPMSFVVLKLVIAVAAIAYVTYLLACSGNATQGGIPIVMLIIGVLIGVYWFALNRTVYGRNVYAVGGNRKAAILSGIDTKATDFKIFLNMGFLTSIAAVITLSRLASATAQTGMEFEMDAIAACFIGGTAVTGGIGTIPGAMVGALIMGVLNQGLSIMGVDAAWVKTIKGLVVIAAVAYDLVSKRKKG*