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NECEvent2014_3_5_scaffold_1492_4

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 1964..2908

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LacI n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RHC8_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 313.0
  • Bit_score: 322
  • Evalue 3.50e-85
  • rbh
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO98381.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 315.0
  • Bit_score: 613
  • Evalue 2.40e-172
regulatory protein LacI similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 313.0
  • Bit_score: 322
  • Evalue 1.00e-85

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGCAGGCCAATATCGAAGACGTGGCGCAGCTGGCTGGTGTCTCCATCGCTACGGTTTCGCGTACTTTCAAGCATCCTGACGTGGTAGCGAAGAAGACACGTGACAAGGTTCTGGCTGCCGCAAATGAACTGAATTTTTCGATCTCTCGCTCCGCCACTGTGTTTCAGGCCGGGCGGACGTACCGTATTGCCCTATTGCTGAACGATCGCTTTGCGTCATGGTTCAACGCACGAATTTACGAGGGCCTTGATGCAGTGTTCAATCCGGCCGGTTACGACATCTCCGTCTACCCCATCTCCACCAAGGAAGACAGGCGCACTTTTTTCGAGAACCTACCGATTCGCCGCAACGCTGATGCCGTAATCATTCCCTCCTTCGACATAGACCCTGATGAGGCGAGTCGTTTGCAAAGTGCGAACCTACCGCTTGTCGGCATTAATGCATTGCCTGAAAGCGCCTTTACGTTGTCTGTTTCCATCGACGATGAGCAGGCGATGCGACTCGCTACGCGGTACCTTATTACATTGGGGCATCGAAATATCGCTTTCATTGGATTGACTCATACGAACCAGTCGCATCTGCAATTCAGCGCAAGCCGCCGCGTCGCCGGTTTCCGAAAGGAATGTAAGGCTGCCGGAATATCGCCGATTGTGTTGAGCGTAGCAGAAGATGAGCAGCGCGTCGACAACGCATTGACGCAACTGTTTACATTACCTACCATGCCAACTGCCATCTGCTGCCAGCAGGATTCGCTTGCCGTGCCGCTGTATGTTAAGTTGCAGCAACAGGGGTATGCCGTGCCGCACGATGTTTCCGTAATCGGATTTGATGATAATTTCTATGCACGTCAGCTTGGATTGACCACGGTTCGTCAGCAACCTCATGATATGGGTGTGATTGCAGCACGGCGCACTCTTGCATTGCTGCGTGGTGAACAGGTAGAG
PROTEIN sequence
Length: 315
MQANIEDVAQLAGVSIATVSRTFKHPDVVAKKTRDKVLAAANELNFSISRSATVFQAGRTYRIALLLNDRFASWFNARIYEGLDAVFNPAGYDISVYPISTKEDRRTFFENLPIRRNADAVIIPSFDIDPDEASRLQSANLPLVGINALPESAFTLSVSIDDEQAMRLATRYLITLGHRNIAFIGLTHTNQSHLQFSASRRVAGFRKECKAAGISPIVLSVAEDEQRVDNALTQLFTLPTMPTAICCQQDSLAVPLYVKLQQQGYAVPHDVSVIGFDDNFYARQLGLTTVRQQPHDMGVIAARRTLALLRGEQVE