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NECEvent2014_3_5_scaffold_809_4

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(2987..3574)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD {ECO:0000313|EMBL:ETO97993.1}; EC=2.1.1.171 {ECO:0000313|EMBL:ETO97993.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 384
  • Evalue 1.10e-103
RNA methyltransferase, RsmD family n=2 Tax=Bifidobacterium dentium RepID=E0Q919_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 195.0
  • Bit_score: 376
  • Evalue 1.70e-101
  • rbh
methyltransferase similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 195.0
  • Bit_score: 376
  • Evalue 4.70e-102

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCGCGTTATTTCAGGACGATTCAAGGGTGTGGCGCTGACCACGCCGAAAACCGGTACCAGGCCGACCACCGACAGGACCAAAGAAGCGATATTCTCGCATCTGGATTCGTGGGGAGTGCTGGACGATGCGCGCGTACTCGACCTGTTCGCCGGAACGGGAGCTTTGGGCATCGAGGCGTTGAGTCGTGGCGCGCGAGAACTCATAGCGGTGGAATCCTCCGCACCGGCGGCAACGTTGATCGCGCGTACGCTGACTGCATTGAAGCGCAACCGTTCATGGGAATCGGGCATGAGCGCGCGTGTAATCAAGGCGCGTGCCGAAAAATATGCGGCAGGGGCCGCCGTCGCATCGTTCGACGTGATTTTCATCGATCCGCCGTATATCTTCGAAACCGAGGCCTGCAATCAGTTGCTGTCTGACCTAGCGGGCGGCGACATGACATCCTCCGATACCATCATCGTGCTGGAACGGTCCACACGATCCGATGACCCGACTCCGCCGGACGGTTGGGCGATCGCCGACCGCCGTGACTATGGCGAAACCGCCGTGTACTACATCGAGCCCGCCAGCGTCGGTAATCTCTGA
PROTEIN sequence
Length: 196
MRVISGRFKGVALTTPKTGTRPTTDRTKEAIFSHLDSWGVLDDARVLDLFAGTGALGIEALSRGARELIAVESSAPAATLIARTLTALKRNRSWESGMSARVIKARAEKYAAGAAVASFDVIFIDPPYIFETEACNQLLSDLAGGDMTSSDTIIVLERSTRSDDPTPPDGWAIADRRDYGETAVYYIEPASVGNL*