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NECEvent2014_3_5_scaffold_3080_2

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(277..981)

Top 3 Functional Annotations

Value Algorithm Source
vicR; response regulator protein Vicr (EC:2.7.7.65) similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 234.0
  • Bit_score: 459
  • Evalue 6.60e-127
Sensory transduction protein RegX3 n=2 Tax=Bifidobacterium dentium RepID=E0Q8T7_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 234.0
  • Bit_score: 462
  • Evalue 3.60e-127
  • rbh
Sensory transduction protein RegX3 {ECO:0000313|EMBL:ETO98187.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 463
  • Evalue 2.30e-127

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACACGTATTCTGATCGTCGAAGACGAGGAATCGTATCGAGAACCGCTGGTCTACCAGCTCACTCGCGAAGGCTATGACGTGTCCGCCGCAGCCACCGGCGAGGACGGGCTGGAACTGTTCACCCAGGGAGGCGTCGATCTGGTACTGCTCGACCTGATGCTTCCCGGTCTCGACGGTACCGCGCTGTGTCGCAGGATTCGTGAGCAAAGCCGTGTGCCGATCATCATGTTGACCGCCAAAAGCGCGGAAATCGACAAGGTGGTCGGTCTGGAGATCGGTGCGGACGACTATGTGACCAAGCCGTACTCCTTCCGCGAACTGCTGGCCCGCGTCCGCGCGGTATTGCGCCGCAATCAGATGGTCGCCGAATCCGACAGCGCCTCCGATGATGATATTCCGCTCGTGTGCGGCGACATCTCGATGAAGATCGGCCAGCATGAGGTGAGCGTGCGCGGTGAGAACGTGTTCTTCCCGCTCAAAGAATTCGAGCTGCTGGAATATCTCATGCAGAACAAGGGTCGCGTAATGACCCGTCACCAGCTCATCGACCGCATCTGGGGTTCCGATTACGTCGGCGACACCAAGACGCTGGATGTGCACGTCAAGCGTGTGCGTTCCAAGATCGAAGAGGATCCTGCGCACCCGAAATACCTGACCACCGTGCGTGGATTGGGATACAAGATCGATTCCCCGATCGAGTGA
PROTEIN sequence
Length: 235
MTRILIVEDEESYREPLVYQLTREGYDVSAAATGEDGLELFTQGGVDLVLLDLMLPGLDGTALCRRIREQSRVPIIMLTAKSAEIDKVVGLEIGADDYVTKPYSFRELLARVRAVLRRNQMVAESDSASDDDIPLVCGDISMKIGQHEVSVRGENVFFPLKEFELLEYLMQNKGRVMTRHQLIDRIWGSDYVGDTKTLDVHVKRVRSKIEEDPAHPKYLTTVRGLGYKIDSPIE*