ggKbase home page

NECEvent2014_3_5_scaffold_3100_1

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 298..1287

Top 3 Functional Annotations

Value Algorithm Source
spoU; SpoU rRNA methylase family protein (EC:2.1.1.34) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 329.0
  • Bit_score: 631
  • Evalue 1.40e-178
SpoU rRNA methylase family protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7M8_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 329.0
  • Bit_score: 631
  • Evalue 4.80e-178
  • rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28096.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 329.0
  • Bit_score: 631
  • Evalue 6.80e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGGCAATGAAAAAAGGACCGACCAAGGGGTCGGGCGGAAAACATCGTAATGCGCTAAGGGGCAAGGGACCGACTCCCAAGGCCGAGAATCGCGTATATCACAAGGCCTATAAGGCCAAAAAAGTCGCCGATCGCCGTAAAATGGCCGATCCGCGACTGGCTGCACGCCGTCGCGTGGCAAAGTTCGCTTCGGAATCCGACGATCTGGTCATCGGTCGCAACGCGGTGCTCGAGGCGCTGCGCTGCGGCGTTCCGGCTTCGACGCTGTATATCGCAGCACGCATCGAACATGATGATCGCACACGCGAAATCGTGCGTCTCGCCGGCATTCACGGCCTGCATCTCATGGAGGCGGACCGTTTGGAGATGGATCGCATCGCACGCTCTTCCAATCACCAGGGCATAGTGATGAAGGCACAGCCGTTCCAGTATTCGTCATTGGCTGAACTCGTGGAACGCGCGGACAAGAAGTCCCGCGCCATGGAAGCCGCAAATTCGGAAGCCGCGCGCATCGCGGCCCGTCCGCTGTTCATCGCGCTCGACGGCGTCACCGACCCGCAGAATCTGGGCGCGGTCATCCGTTCCGCAGCGGCATTTGGTGCCAATGGCGTGATTCTGCCGGAGCGTCGTTCCGCTTCGGTTACGGCTGCCGCCTGGAAGGTGTCCGCCGGCGCGGCCGCGCATATGCCGGTCGCCCGTGTAGTGAATCTGACCAAGGCGATCGAAAGCCTGAAGGAACGCGGTTATTACAGCATCGGTCTTGACGGCGGCGGCGATGCGCTCGTCGGCGAAACCGGTTTTGAAACCGATCCGCTCGTCGTCGTGCTTGGGTCCGAAGGCAATGGCCTGAGCCGTCTGGTGCGCAGCACATGCGACGTCATCGCCGGTATTCCGATGTCGAGCATGGTCGAGTCGCTCAACGCGTCCGTCGCAGCCGGCATCACGCTGTATGCAGTGGCCCGCGCCCGTCGGGAAGCCGCCAACAACTAA
PROTEIN sequence
Length: 330
MAMKKGPTKGSGGKHRNALRGKGPTPKAENRVYHKAYKAKKVADRRKMADPRLAARRRVAKFASESDDLVIGRNAVLEALRCGVPASTLYIAARIEHDDRTREIVRLAGIHGLHLMEADRLEMDRIARSSNHQGIVMKAQPFQYSSLAELVERADKKSRAMEAANSEAARIAARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHMPVARVVNLTKAIESLKERGYYSIGLDGGGDALVGETGFETDPLVVVLGSEGNGLSRLVRSTCDVIAGIPMSSMVESLNASVAAGITLYAVARARREAANN*