ggKbase home page

NECEvent2014_3_5_scaffold_326_1

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 2..622

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=997872 species="Bacteria; Actinobacteria; Cori similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 409
  • Evalue 2.60e-111
RNAse R (EC:3.1.13.1 3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 200.0
  • Bit_score: 191
  • Evalue 2.30e-46
Ribonuclease R n=2 Tax=Atopobium RepID=N2BUN6_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 409
  • Evalue 1.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
TCCAAGGCGGTGTATGCTCCGCATAACCAGGGGCACTATGCTTTGGGCGCACCCGCGTATTGCCACTTTACGTCACCCATTCGCCGCTATCCGGATGTCCTGGTACACAGAGCACTTAAAGCATTGGGCGCAGGTAAGACATTTGAGGCATCGGAAATTGTAAGCACCGCAGTTCACACCCAGGCATCCACTGCTCACGACGCAAGGGCTTCTCGTCCACCGCAAACAGCGCAAAAGAAGGTGGATTTGCTGCCGCAGCTTTGTCGCAGCTGTTCTGAGAAGGAGCGGGTGGCCGAGGCGGCTGCACGCGCTTCTCAGCGAGTAAAGATGGCTCAGTATTATGAACAGCGTATTGGCGAGAAAACCATGGCTACCGTTACTGGATGTGAGCGGTTTGGTGCGTTTGTCACCCTGGATGCCGCCTATGCCGATGCTCTCATTCCCCTAAAGTTGTTGGGGGATGAGTGGTATATATTTGATGAGGCACACAGGTCTCTTACCGCGGAGTCTTCGGGGATGGTTTTGCATCCGGGCAGTCGTGTGGCTGTGCAAGTGCGCAGCGTTACGGTAGCGCGTGGACAAATTGATGTAGCGCTCATATCTCAGGACCAGCTTGGGTAA
PROTEIN sequence
Length: 207
SKAVYAPHNQGHYALGAPAYCHFTSPIRRYPDVLVHRALKALGAGKTFEASEIVSTAVHTQASTAHDARASRPPQTAQKKVDLLPQLCRSCSEKERVAEAAARASQRVKMAQYYEQRIGEKTMATVTGCERFGAFVTLDAAYADALIPLKLLGDEWYIFDEAHRSLTAESSGMVLHPGSRVAVQVRSVTVARGQIDVALISQDQLG*