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NECEvent2014_3_5_scaffold_381_3

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 1063..1872

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 269.0
  • Bit_score: 541
  • Evalue 5.80e-151
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 267.0
  • Bit_score: 327
  • Evalue 4.50e-87
tRNA pseudouridine synthase A n=2 Tax=Atopobium RepID=N2BW97_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 269.0
  • Bit_score: 541
  • Evalue 4.10e-151
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCAAGCAGTGCAAGAACATGAGGCAACTATGGTACTCAAACTGGGGTATCGTGGTGCGGGCTTTTCTGGTTTTGCAGCCCAGCCGGGTGATGTGCGCACCGTAGCTGGAGAGCTGAGTCGTGCACTGTCTGTGTACCTGCATAGACCCGTAGAGATTACCTGTGCAGGGCGCACGGATGTGGGTGTGCATGCGTTAGCGCAGCATGTGAGTTTGCCCGTGTATGAGCATGAGTTGAGCCTCAGTGGCCCGGTTATCAAGCGGGCGCTTAATGCCCTGGTGGGAGATGACATCTCCGTATCCGAAGTATATAAGGCACGTGCGGGTTTCTCGGCACGCTTTGACGCAGAAGCTCGCAGCTATCGCTATCGTATTGCAGACGGCTGGACAAGGCCGGTTATGGCATGGGATCATGCGTGGTGGCTGCGCACTCAGCCAGACGTTAAGGCCATGAATCGGGCGGCTCAAGCGCTGGTAGGGGAGCACGATTTTAAGAGTTTTTGTAAGGCGGCCTCTGCGGTAGACAAGCCAACACAGCGCCGGGTTTTGTCGGTAGGCGTGTCTCGCATTGAGGAGGCGGGCGAGCAGCTCATTGCGGTGGATATTACGGGCAATGCTTTTTTGCACTCCATGGTGCGTACGATTGTGGGCAGTCTGGTTGAGGTAGGCTGCGGTCGTAAAGAGGAACGCTGGATCCGCGAGGTGTTGGCACAGTGCGATAGGCGTGCGGCAGGTCAGTGTGCTCCAGCAAAGGGCCTGGTATTTACCGCAGTCCACTATCCTACGGATTCATTTGAGCCCTGGCTATAA
PROTEIN sequence
Length: 270
MQAVQEHEATMVLKLGYRGAGFSGFAAQPGDVRTVAGELSRALSVYLHRPVEITCAGRTDVGVHALAQHVSLPVYEHELSLSGPVIKRALNALVGDDISVSEVYKARAGFSARFDAEARSYRYRIADGWTRPVMAWDHAWWLRTQPDVKAMNRAAQALVGEHDFKSFCKAASAVDKPTQRRVLSVGVSRIEEAGEQLIAVDITGNAFLHSMVRTIVGSLVEVGCGRKEERWIREVLAQCDRRAAGQCAPAKGLVFTAVHYPTDSFEPWL*