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NECEvent2014_3_5_scaffold_699_2

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(1198..2280)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 360.0
  • Bit_score: 707
  • Evalue 1.10e-200
tRNA-dihydrouridine synthase n=2 Tax=Atopobium RepID=N2BTM8_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 360.0
  • Bit_score: 707
  • Evalue 7.60e-201
  • rbh
tRNA-U20-dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 346.0
  • Bit_score: 395
  • Evalue 1.80e-107

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGCATGTCTGTAGCTGAACTGCTTAAAACCTACGGACCTCCCGCGGGCTTATCGTCAGAGATACTTCCTGCTCCACGTGAGACCTCCTTTGCCCAGCGTCTGGCTCATAATCCGTTTTTGATGGCGCCTATGGCCGGTGTATCCGATGCGGCATATCGCATTATGGCCCGTGCGGGAGGTGCGGCTTGGGCTGTCAGTGAGATGGTTTCCGTTGCTGGTCTGCATTACGGTGGCGAGAAAACCTGGGAGCTTGCGATCCCCCATGATGCCGAGCCTGACCTTGTGGTGCAGTTATTTGGCAGCAAACCAGAACAGTTTGCTGAAGCCGCACAGGCGGTGACGGAGCGGCTCGGCAAGCGTTTAAGCGCTCTTGATGTCAATATGGCGTGCCCGGTGCCCAAAGTGACGCGTAAGGGCGAAGGTTCGGCGTTGCTGGATGATCCACAGCGCGCCGCAGATATCATTGCGAGCGTGGTGCAACATACCAATGTTCCCGTTACGGCAAAAATTCGTATAGCTCGTGTACCCGAGCATATTGTGGGGCCAGAGTTTGCAAAAAGATTAGAAGCTGCGGGAGTTTCTGCGCTTGCGGTGCATGGGCGCAGTGCTTCACAGCTCTATCGTGGCCAGTCGAGCTTGGATCAGGTATGTGCGGTTGCAAATGCGGTGTCTATTCCTGTTATTGGATCAGGAGATGTGTTAACGCCCGAAGCTGCTGCCTTGATGGTTGCGCAAACACCCTGTTTGGGAGCGTATGTGGCGCGAGGCAGCTATGGTAATCCGTGGCTGTTCCATGATGCTGCCCAGCTGCTGCAGGGCAAGCCAGCTGCCAAGCATGACATTATTCAGCGCCTCAATGCCTTTGAGCTGTATGTTCGTTTATTGGTTGCAACGGGCGCGCATCTCGCTCGTGCACGAAGCCTTGCCGGTTGGTACCTACGGGGCATTCCACAGGCAGCTGCCTGGCGACAAAAAGCGGTGAGCTGTAACAGTGCTCAGGAATACTACGAGCTCATAGCTCAGGTGAAAGATGAGCTTGCTGTACACGCAGTGCATGCAGCACATGACGGCGTGAGCTAA
PROTEIN sequence
Length: 361
MSMSVAELLKTYGPPAGLSSEILPAPRETSFAQRLAHNPFLMAPMAGVSDAAYRIMARAGGAAWAVSEMVSVAGLHYGGEKTWELAIPHDAEPDLVVQLFGSKPEQFAEAAQAVTERLGKRLSALDVNMACPVPKVTRKGEGSALLDDPQRAADIIASVVQHTNVPVTAKIRIARVPEHIVGPEFAKRLEAAGVSALAVHGRSASQLYRGQSSLDQVCAVANAVSIPVIGSGDVLTPEAAALMVAQTPCLGAYVARGSYGNPWLFHDAAQLLQGKPAAKHDIIQRLNAFELYVRLLVATGAHLARARSLAGWYLRGIPQAAAWRQKAVSCNSAQEYYELIAQVKDELAVHAVHAAHDGVS*