ggKbase home page

NECEvent2014_3_5_scaffold_956_4

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 1712..2860

Top 3 Functional Annotations

Value Algorithm Source
2-hydroxyglutaryl-CoA dehydratase, D-component n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TFC2_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 382.0
  • Bit_score: 776
  • Evalue 1.40e-221
  • rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22138.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 382.0
  • Bit_score: 779
  • Evalue 3.10e-222
2-hydroxyglutaryl-CoA dehydratase subunit D similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 382.0
  • Bit_score: 769
  • Evalue 3.70e-220
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1149
ATGAATAAATTACCAGATTTTATTAAGGACTTTAGTGAAGCTAAAAGAAATTCATTTGTAAAAATGAAGGAAATTAAAGATGAAGGTGGAAAAATAGTGGGAGTTTATTGTGGATTTGCTCCCTGGGAAGTTATAGCTGCATCAGGAGCAGTGGGGGCTTGGCTTTGTGGAATGGATGAGGAACCTATAGATGATGCAGAAAAACATTTGCCAAGAAATTTATGCCCACTAATAAAATCAAGTTATGGTTTTGCATTAACAGAAAAATGCCCATTTTATTATTTTTCAGATATGCTTTTAGGAGAAACTACTTGTGATGGAAAAAAGAAAATGTATGAAGCATTAAGTAAAATGAAACCTATGCATGTTATGAATATACCCCAAACCCCTTATGGAAAGGATTCCTATAGTTATTACAAGAAAGCAATTATAAAGCTTAAAGAGGAATTAGAAAAGAATTTGAATGTAGAAATTACGGAAGAAAAGTTAAAAGAAAAAATTAAATTAAGAAATAGGGAAAGAACGGCTTTAAGAGATTATTATAGCTTATCTAAACTTTGTCCACCACCTATGACAGGTTATAATTTGAGAAGGGTAATACAGGGGACTTTATATTTATCAGATAAGGAAAAGGAAATAGAGGATATAAATAATATAATAAGAGAAACAATGAAAAAATATAATGAAGGTGAAAGGCCTGTTTCTAAAGAGGCTAAAAGAATACTTGTAACAGGTTGTCCTCTAGGAGATTCTACTGAAAAAGTAATTGAGGCTATAGAAGATAATGGAGGAGTAGTAGTTTGTTATGAAAATTGTAGTGATGCAAAAGATGAAAGTTTATTAGTAGATGAAGAAAAAAATCCAATGGATGCATTAACAGAAAGATATTTAAGAACAGCCTGTGCTTGTATGAGTCCTAATGATAATAGGATAGAATATTTAGATTATTTAATAGATGAATATAGGGTGGAGGGTGTAGTAGAAGTTATATTACAAGCATGTCATACCTATAATATAGAATCTCATAGAATAAAAACTTTTGTTACAAATAATAAAAAAGTAGCTTATTTAAAAATAGAAACAGATTATTCTAAAAGGGATTTAGGCCAACTAAAAACTAGAGTAGAGGCTTTTATAGAAATGCTATAA
PROTEIN sequence
Length: 383
MNKLPDFIKDFSEAKRNSFVKMKEIKDEGGKIVGVYCGFAPWEVIAASGAVGAWLCGMDEEPIDDAEKHLPRNLCPLIKSSYGFALTEKCPFYYFSDMLLGETTCDGKKKMYEALSKMKPMHVMNIPQTPYGKDSYSYYKKAIIKLKEELEKNLNVEITEEKLKEKIKLRNRERTALRDYYSLSKLCPPPMTGYNLRRVIQGTLYLSDKEKEIEDINNIIRETMKKYNEGERPVSKEAKRILVTGCPLGDSTEKVIEAIEDNGGVVVCYENCSDAKDESLLVDEEKNPMDALTERYLRTACACMSPNDNRIEYLDYLIDEYRVEGVVEVILQACHTYNIESHRIKTFVTNNKKVAYLKIETDYSKRDLGQLKTRVEAFIEML*