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NECEvent2014_3_5_scaffold_3927_1

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 52..369

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T9N9_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 105.0
  • Bit_score: 206
  • Evalue 1.20e-50
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDU38833.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogen similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 105.0
  • Bit_score: 203
  • Evalue 1.40e-49
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 102.0
  • Bit_score: 188
  • Evalue 1.30e-45

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 318
ATGAATAGAAATAAAAATTTACCACTAACAGAAACAACATATTATATTCTTTTAGCATTATTAGAGCCTGGTTATGGCTATATTATAATGGAAAAAGTTGAAGAATTAAGTAACTATCAAGTTAAGATAGCAGCGTGAACTCTTTATGGAGCCATTGAAAATTTGTTGAAACAAAAACTAATAAAATTTGTAGGTACAGAAGATAATAGGCGAAAAGTTTATGTGATTACTCAAAAGGGAAAAGAAATTTTGCTTTTGGACATTGAAAGAATGCATCATATGATTAAAATAGCAGAAAGTAAATTTGGGGGGAATTAA
PROTEIN sequence
Length: 106
MNRNKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAA*TLYGAIENLLKQKLIKFVGTEDNRRKVYVITQKGKEILLLDIERMHHMIKIAESKFGGN*