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NECEvent2014_3_1_scaffold_1685_1

Organism: NECEvent2014_3_1_Staphylococcus_epidermidis_32_8

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(543..1124)

Top 3 Functional Annotations

Value Algorithm Source
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR n=5 Tax=Staphylococcus epidermidis RepID=ICAR_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 185.0
  • Bit_score: 377
  • Evalue 7.40e-102
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ39178.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 193.0
  • Bit_score: 390
  • Evalue 1.50e-105
icaR; intercellular adhesion regulator similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 185.0
  • Bit_score: 377
  • Evalue 2.10e-102

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Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 582
TTGAATAAGGGGGAGATTTTAGAATTGAAAGATAAGATTATTGATAACGCAATAACCTTATTTTCCGAAAAGGGGTACGATGGTACTACACTTGATGATATTTCTAAAAGTGTAAATATAAAAAAGGCTAGTCTATATTATCATTACGATAATAAGGAAGAAATATATCGAAAAAGTGTTGAGAATTGTTTCAATTACTTTATAGATTTTTTGCTTAGGAACCATGATGATAATTATTCCATTGACGGACTTTACCAGTTTTTATTCAAATTTATATTCGACGTTGATGAGAGATATATTAAATTATATGTTCAATTATCTAGTGCTCCAGAAGCACTGAATTCAGAAATCAAACACCATCTTCAAGAAATTAATACTACCTTACATGATGAATTGATAAAGTATTATGATCCTACGCACATCGCTTTGGATAAAGAGGACTTTATAAACTTAATTCTTCTTTTTCTTGAGACTTGGTATTTTAGAGCCTCCTTTTCACAAAAATTCGGGATTATTGAGGACAGTAAAAACCGTTTTAAAGACCAAGTATATTCACTGTTAAATGTATTTTTAAAAAAATAA
PROTEIN sequence
Length: 194
LNKGEILELKDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYHYDNKEEIYRKSVENCFNYFIDFLLRNHDDNYSIDGLYQFLFKFIFDVDERYIKLYVQLSSAPEALNSEIKHHLQEINTTLHDELIKYYDPTHIALDKEDFINLILLFLETWYFRASFSQKFGIIEDSKNRFKDQVYSLLNVFLKK*