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NECEvent2014_3_2_scaffold_636_2

Organism: NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4
Location: comp(523..1071)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium ultunense Esp RepID=M1Z9Z5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 180.0
  • Bit_score: 174
  • Evalue 9.00e-41
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCQ94669.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 180.0
  • Bit_score: 174
  • Evalue 1.30e-40
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 161.0
  • Bit_score: 155
  • Evalue 2.10e-35

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
ATGTTGGATAAATTAATTGAAGAAGCTAGAAAAGGAAATAGGGCGGCAGCAGGAGAAATTATCAATAGATTGCAGCCATTGGTTATAAGCTCAATTAGAAAATATTATAATAATGGAAAAGAGTATGAGGATTTAATACAAGAAGGTAATTTAATGATTTTGGAAAGTTTAAAGAGCTATGACTCTACTAGGGCCGTACATTTCTTAGGATATATAAAATTGAATCTCAAATATCTATATCTAAATAAACATAAAAGAAAAATACATCTATCCCTAAACGACTCGATAGCAGATGGAGAACTGGAAATCATAGATATTCTAGTATCAGATGACAAAGCTGCACTGGATATAGTATTAGAAGATGAAAGAAATATCCAGCTTAACAAAGCTCTAGAAAAGCTTACTGAAAGGCAGAGAGAAATAGTAATTCTTTATTATGTAAAAAATATGAGTATTGGTTATATAGGAAGTAAGCTTGGTATAAGCTACAGAACTGTGGTAAATACAAAGACTAGAGCCTTAGAAAATTTAAAAAAATGGATAAGGTAA
PROTEIN sequence
Length: 183
MLDKLIEEARKGNRAAAGEIINRLQPLVISSIRKYYNNGKEYEDLIQEGNLMILESLKSYDSTRAVHFLGYIKLNLKYLYLNKHKRKIHLSLNDSIADGELEIIDILVSDDKAALDIVLEDERNIQLNKALEKLTERQREIVILYYVKNMSIGYIGSKLGISYRTVVNTKTRALENLKKWIR*