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NECEvent2014_3_2_scaffold_1275_2

Organism: NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4
Location: comp(149..1300)

Top 3 Functional Annotations

Value Algorithm Source
rpoD3; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 379.0
  • Bit_score: 598
  • Evalue 1.10e-168
RNA polymerase sigma factor SigA n=1 Tax=Clostridium ultunense Esp RepID=M1Z3C1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 384.0
  • Bit_score: 608
  • Evalue 3.90e-171
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 384.0
  • Bit_score: 607
  • Evalue 1.20e-170

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1152
TTGGACGAATTAAATAAAGACAATGAAAAAACAAATATGGCGAGAATAGAAGCAGTTAAGAAATTGATCGCTAAGGGAAAAAAGGAAGGGATATTAACATATAGTGAATTAATAGATAGTTTAGAGGAGATATCTTTAGATGCAGACCAGATAGAAGAGGTTTATCAGAGTTTGGAAAGTATGGGAATTGAAGTAGTAGGAGATAAAGAAGATAGCTTGTTGCTAGAAAAAGATGACATTGATGACGATATGGATGATGATATTGATAAGGAAGATTTAGATGAAGTAGATATAAAAGAAGATTTATCAGTACCAAAAGGCATCAATGTAGATGACCCAGTTAGGATGTATCTGAAGGAAATTGGTAAAATACCTTTATTAACAGGAGATGAAGAGATTGAATTAGCTAAGAGGATGCAAGAAGGTGATGAAGAAGCAAAAAAACAACTTGCAGAGGCTAATCTTAGGCTAGTAGTTAGCATTGCAAAGAGATATGTAGGTAGAGGTATGCTTTTCCTAGATTTGATCCAAGAGGGCAATCTAGGACTTATGAAGGCAGTAGAAAAATTCGATTATAAAAAAGGATTTAAGTTTAGTACCTATGCAACATGGTGGATTCGTCAAGCAATTACAAGAGCTATAGCAGATCAAGCTAGAACTATTAGGATACCTGTTCATATGGTTGAAACAATCAATAAATTAGTTAGAGTACAAAGACAACTAGTGCAAGAACTAGGAAGAGATCCTAGTCCAGAAGAAATAGGTAAAGAAATGGGTATGGAAGTGGAAAAGGTTAGAGAAATAATGAAAATAGCACAGGAACCAGTTTCTTTAGAAACTCCTATTGGTGAAGAAGAAGATAGTCATTTAGGAGACTTCATACCTGATGATGAGGTACTAGCTCCTGCAGAAGCAGCTACATTTACAATGCTTAGGGAACAATTGATTGATGTATTAGATACTTTGACACCTCGGGAGCAAAAAGTATTGAGGCTTAGATTTGGTTTAGATGATGGTAGAGCTAGAACCCTTGAAGAAGTTGGTAAAGAGTTTGAAGTTACAAGAGAAAGAATTAGACAAATAGAAGCTAAGGCTTTAAGAAAGTTGCGTCATCCAAGTAGATCTAAAAAATTGAAGGATTTTCTAGAATAA
PROTEIN sequence
Length: 384
LDELNKDNEKTNMARIEAVKKLIAKGKKEGILTYSELIDSLEEISLDADQIEEVYQSLESMGIEVVGDKEDSLLLEKDDIDDDMDDDIDKEDLDEVDIKEDLSVPKGINVDDPVRMYLKEIGKIPLLTGDEEIELAKRMQEGDEEAKKQLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLMKAVEKFDYKKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVQRQLVQELGRDPSPEEIGKEMGMEVEKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEVLAPAEAATFTMLREQLIDVLDTLTPREQKVLRLRFGLDDGRARTLEEVGKEFEVTRERIRQIEAKALRKLRHPSRSKKLKDFLE*