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NECEvent2014_3_2_scaffold_1867_2

Organism: NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4
Location: 378..1271

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1288971 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 298.0
  • Bit_score: 323
  • Evalue 3.60e-85
mfd; transcription-repair coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 299.0
  • Bit_score: 273
  • Evalue 8.60e-71
Transcription-repair-coupling factor n=1 Tax=Clostridium ultunense Esp RepID=M1ZF58_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 298.0
  • Bit_score: 323
  • Evalue 2.50e-85

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGCTAAATTTTTTAGTAGATCCGCTAAATAACTTAGATGTTTATAATAAGCTGAAGACAGATATAGAAAAGAAGAATAGTCCTATGGCCACTTATGGTATTATTGATGAAAGCATAGGACATATTCTTTATGCCCTAAGGGAGCATACTAAAAGGCAAATACTATTGGTAACTTACAACGAGGTAAGAAGTAGAAAGATTTATGAAGATATAAGAAACTTAGGAAATAATAATGTATTTCTGCTTCCAAAAAGGGAATTAGTTTTTTATGAAGTAGATGCCTTCAGCTATGAAAGTACCAATGAAAGGCTTGGGATTGTATCTAGACTTGTAAAAGGCGAAGATTTATTATTAGTTACCTCTATAGAAGCCATATTTCATAAGCTTATGTCTAGAGATGTTTTGAAGTCCTATTCCCATGAATTGAGATTAGGAGAAGAAATAAACTTAGATGATTTAATTAAGTTGTTGACAGATGGTGGATATGAAAGAGTAAATATGGTGGAAGGTATAGGACAGTTTAGCTTAAGAGGTGGAATTATGGATTTCTTTCCGCCATATAGCGGGAACCCTATTAGAATTGAATTGTTTGATGAGGAAATTGATTCTATAAGGACTTTTGATATTACGAATCAAAGATCTATTGAAGTCCTCGATTATACATTCATATTTCCAGTAAAAGAAACTTTGATATTAGATGAATATAGAGAGAATATAATTGACAACTTGAATAAAGATTTAATTAAATCTTTATCTAAGTCAAAGATTAGTGTAATAGAAAAAGAAAACTTAGAAAGTAAGTTTAATAAATATAAGGAGCATTTAACTGAAAAATTATTTATATCTAATATGGATATGATAATTCCTTATATACCAAAAGAATATCTGTCATCT
PROTEIN sequence
Length: 298
MLNFLVDPLNNLDVYNKLKTDIEKKNSPMATYGIIDESIGHILYALREHTKRQILLVTYNEVRSRKIYEDIRNLGNNNVFLLPKRELVFYEVDAFSYESTNERLGIVSRLVKGEDLLLVTSIEAIFHKLMSRDVLKSYSHELRLGEEINLDDLIKLLTDGGYERVNMVEGIGQFSLRGGIMDFFPPYSGNPIRIELFDEEIDSIRTFDITNQRSIEVLDYTFIFPVKETLILDEYRENIIDNLNKDLIKSLSKSKISVIEKENLESKFNKYKEHLTEKLFISNMDMIIPYIPKEYLSS