ggKbase home page

NECEvent2014_3_2_scaffold_2225_1

Organism: NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4
Location: comp(3..1076)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1288971 species="Bacteria; Firmicute similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 357.0
  • Bit_score: 558
  • Evalue 6.10e-156
topA; DNA topoisomerase 1 (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 357.0
  • Bit_score: 486
  • Evalue 5.90e-135
DNA topoisomerase 1 n=1 Tax=Clostridium ultunense Esp RepID=M1ZLM8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 357.0
  • Bit_score: 559
  • Evalue 1.90e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1074
TTGCAAAAAAACTTAGTAATAGTTGAGTCCCCAGCTAAAGCAAAAACTATTGAAAGATTCTTAGGAAAAAATTATAAAGTTGTAGCTTCTGTAGGGCATATAAGAGATTTACCAAAGAGTAGTTTAGGAATTGATATAGATAAACAATTTGAGCCTAAATATATAACGATAAGAGGTAAAGGTCCTGTAATTAAGGATTTAAAAGAGGTGGCTAAAAAATCAAAGAAGATATTTCTTGCTACTGACCCTGATAGAGAAGGGGAGGCAATTTCTTGGCATTTGGCTCATATTTTAGGGATAGATGAAAAAGAAAAAGTAAGGGTAGAATTTAATGAGATAACTAAAGATGCTATAACAAATGCTATTAAGAAACCTAGAGCAATAGATTTAAGCTTAGTTGATGCACAGCAGGCTAGAAGAATATTAGATAGACTTGTTGGTTATAAAATTAGTCCTTTGTTATGGAGAAAAATCAGAAAAGGTTTAAGTGCAGGAAGAGTACAATCTGTTGCTGTTAAATTAATTTGTAATAGAGAGAATGAAATTCAAAATTTTATACCTGAAGAATATTGGAGTATAAAGGTAAAACTAGAAAAAGATAAAGAGAAATTTGAGGCTAATTTTTACGGAGAAAATATAAATGGTAAGGAAACAAAAATCGAATTAAAGACAAAGTCTGATGTAGATGATATATTAAAAAAAGTTGATAATAATAGTTTTACAGTTAGTAATGTAAAAAATGGGACAAAAAAAAGAAATCCCTATCCACCGTATACTACAAGTACATTACAACAAGATGCTTCAAAAAAACTTGGATTTTCTACTAAAAAAACTATGATTATAGCTCAACAATTATATGAAGGAATCGATATTAAGAGTGAGGGTTCTGTAGGTTTAATTACTTATATGAGAACCGATTCTACAAGAATTTCTAAAGAAGCTATCCAAGCGGCTAATCTATATATTAAAGACCATTTTGGGGAGAAATATACTGATGGTGGGAAAGATTTTATTAATAAATCAAAGAAGGATTCACAGGATGCTCATGAAGGAATTAGACCTACAAGTATTACT
PROTEIN sequence
Length: 358
LQKNLVIVESPAKAKTIERFLGKNYKVVASVGHIRDLPKSSLGIDIDKQFEPKYITIRGKGPVIKDLKEVAKKSKKIFLATDPDREGEAISWHLAHILGIDEKEKVRVEFNEITKDAITNAIKKPRAIDLSLVDAQQARRILDRLVGYKISPLLWRKIRKGLSAGRVQSVAVKLICNRENEIQNFIPEEYWSIKVKLEKDKEKFEANFYGENINGKETKIELKTKSDVDDILKKVDNNSFTVSNVKNGTKKRNPYPPYTTSTLQQDASKKLGFSTKKTMIIAQQLYEGIDIKSEGSVGLITYMRTDSTRISKEAIQAANLYIKDHFGEKYTDGGKDFINKSKKDSQDAHEGIRPTSIT