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NECEvent2014_3_2_scaffold_1862_2

Organism: NECEvent2014_3_2_Bifidobacterium_dentium_MSTE12-rel_57_3_partial

partial RP 3 / 55 BSCG 3 / 51 ASCG 0 / 38
Location: comp(712..1059)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=4 Tax=Bifidobacterium dentium RepID=D2QAF2_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 244
  • Evalue 4.50e-62
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 244
  • Evalue 1.30e-62
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 244
  • Evalue 6.30e-62

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGGCAGAACGCAGTCTGCGAGGCATGAGCATCGGCGCAAAATCGCTGGAATCCGATGACAACGTGGATTTCGCGGCACGCAACGACATCGCATACGTATGTCCGAAAGGTCACCGAACCATTCTGCCATTCGCCGAAGGCGCCGAAGTGCCTGACGAATGGGAGTGCCGTTGCGGTGCTGTGGCGCACCGTGAAGGCGATGAGGATCGTCAGGCCGATGAAATCAGCAAACCGACCCGTACCCACTGGGATATGCTGTTGGAACGTCGTAGCGAGGACGAGCTCAAGACCCTGTTGGAGAAGCGGCTGCAGATGCATCGTGACGGCTGGTTCCCGGATTACGAGTGA
PROTEIN sequence
Length: 116
MAERSLRGMSIGAKSLESDDNVDFAARNDIAYVCPKGHRTILPFAEGAEVPDEWECRCGAVAHREGDEDRQADEISKPTRTHWDMLLERRSEDELKTLLEKRLQMHRDGWFPDYE*