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NECEvent2014_9_2_scaffold_294_5

Organism: NECEvent2014_9_2_Enterococcus_faecalis_38_1148

near complete RP 52 / 55 MC: 5 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 4963..8616

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2406
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2406
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=269 Tax=Enterococcus RepID=RPOC_ENTFA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2408
  • Evalue 0.0
  • rbh

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Taxonomy

Enterococcus faecalis → Enterococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3654
TTGATCGATGTAAATAAATTCGAAAGTATGCAAATAGGGCTTGCTTCACCAGAAAAGATCAGAAGTTGGTCTTATGGGGAAGTTAAAAAACCCGAAACAATTAACTACCGTACATTAAAACCCGAACGTGAAGGGTTATTCTGTGAACGCATTTTTGGTCCAACCAAAGACTGGGAATGTGCTTGTGGTAAATATAAACGTATCCGTTATAAAGGTATTGTCTGTGACCGTTGTGGCGTTGAAGTCACTCGTTCAAAAGTACGTCGTGAACGTATGGGACATATTGAATTAGCCGCACCAGTTTCACATATCTGGTACTTTAAAGGAATTCCATCTCGGATGGGTCTTGTTTTAGACATGAGCCCTCGTGCATTGGAAGAAGTCATTTATTTTGCTTCATACGTTGTCATCGAACCAGGTGACACAACATTAGAGAAAAAACAATTGTTAACGGAACGCGAATATCGTGAAAAACGTGAACAATATGGCCAAGCCTTCAAAGCTGCTATGGGTGCCGAAGCCGTGAAACAATTATTAGATAACGTCGATTTAGATGGCGAAGTTGCGCAATTAAAAGAAGAATTAAAAACAGCTTCTGGTCAAAAACGGACACGTGCCATCCGTCGTTTAGACATCTTAGAAGCCTTCCGTGCTTCTGGTAACCAACCAAGCTGGATGGTAATGGATGTTATCCCAGTTATTCCACCAGATTTACGTCCGATGGTTCAATTGGAAGGTGGTCGTTTTGCAACAAGTGACTTAAACGACTTATACCGCCGTGTTATCAACCGTAACAACCGTCTAAAACGTTTATTAGACTTAAATGCGCCAAGCATCATCGTTCAAAACGAAAAACGGATGTTACAAGAAGCGGTCGATGCTTTAATCGATAATGGTCGTCGTGGCCGTCCAGTTACTGGACCAGGTAACCGTCCATTGAAATCTCTTTCTCACATGTTGAAAGGGAAACAAGGTCGTTTCCGTCAAAACTTATTAGGTAAACGTGTTGACTATTCTGGTCGTTCCGTAATCGTCGTTGGTCCGTTCTTAAAAATGTACCAATGTGGTTTACCAAAAGAAATGGCGATTGAATTATTCAAACCATTTGTAATGCGTGAATTAGTACAACGTGAAATTGCAACAAACATTAAAAATGCGAAACGTAAAATCGAACGTGGCGAAGATGAAGTTTGGGATATCTTAGAAGAAGTTATCCAAGAACACCCAGTTTTACTTAACCGGGCACCTACGTTGCATAGATTAGGGATCCAAGCTTTCGAACCTGTTCTTGTTGAAGGTCGTGCGATTCGTCTTCACCCATTAGTTTGTGAAGCCTACAATGCCGATTTCGATGGAGACCAAATGGCGGTTCACGTGCCTCTAAATGAAGAAGCACAAGCAGAAGCTCGTATGTTAATGCTTGCTGCCCAAAATATCTTGAACCCGAAAGATGGTAAACCAGTTGTTACACCATCTCAAGATATGGTCTTAGGTAACTACTACCTAACAATGGAAGAAGAAGGCCGTGAAGGGGAAGGGATGATCTTCCGCGACATGAACGAAGCTGTTTTAGCATGGCAAAATGGCTACGTGCATTTACACTCACGGATTGGGGTTCAAACAACACTTTTAGGTGACAAACCATTTACTGATTGGCAAAAAGAACGAATCTTAATCACCACAGTTGGTAAGATCATCTTTAACGAAATCATGCCTGTTGAGTTCCCTTACTTGAACGAACCAACAGACTATAACTTAACTGTTCAAACACCAGATAAATACTTCGTAGAAGCTGGTACAGACATTCCTGCACACATTAAAGAGCAAGAATTAGTTTTACCATTCAAGAAGAAAAATCTTGGAAATATCATTGCTGAAGTCTTCAAGAGATTCCACATTACGGAAACCTCTAAAATGCTTGACCGCATGAAAGACTTAGGTTACAAACACTCAACTTATGCTGGGATGACAGTAGGGATTGCCGATATCATGGTTCTTCATGAAAAACAAGCAATCATTGATGCTGCCCACAAACAAGTTGAAACAATTACTAAACAATTCCGTCGTGGTTTAATTACTGATGACGAACGTTATGAACGTGTAATCGGCGTTTGGAACGGTGCCAAAGATGAAATCCAACAAAAACTGATCGAAAGTATGGAAGCTCGTAACCCAATCTTCATGATGTCTGACTCTGGAGCCCGTGGTAACATCTCCAACTTTACACAGTTAGCTGGTATGCGTGGTTTGATGGCCGCTCCGAATGGACGAATCATGGAATTACCAATCATCTCAAACTTCCGTGAAGGACTTTCTGTCTTAGAAATGTTTATCTCAACTCACGGGGCTCGTAAAGGGATGACCGATACGGCCTTGAAGACAGCCGATTCAGGTTACTTAACACGTCGTTTAGTTGACGTTGCCCAAGACGTAATCATTCGTGAAGACGACTGTGGCACTGACCGTGGTCTTGAAATCGAAGCCATTCGTGAAGGTAACGAAATTATCGAACCATTAGACGAACGTCTATTAGGTCGTTATACACGTAAATCAGTTGTTCATCCAGAAACTGGTGCAATCATCATTGGTGCGGATCAATTAATCACTGAAGATCTTGCCAGAGAAATCGTGGACGCTGGTATTGAAAAAGTAACCATCCGTTCTGTCTTTACATGTAACACAAAACATGGTGTATGTAAGCACTGTTACGGACGTAACCTTGCAACTGGTTCTGACGTTGAAGTCGGAGAAGCAGTTGGTACAATCGCCGCTCAATCAATCGGGGAACCTGGTACACAGTTAACCATGCGTACGTTCCATACCGGTGGGGTTGCCGGTGACGATATCACTCAAGGTTTACCTCGTATCCAAGAAATCTTTGAAGCACGTAATCCGAAAGGACAAGCAGTGATTACAGAAGTAACCGGTGAAGTTATCGATATTTCTGAAGATCCTGCCACACGTCAAAAAGAAGTAACCATCAAAGGAAAAACAGATACACGTACCTATACTGTCCCTTACACTGCACGTATGAAAGTTGCTGAAGGCGACATCATCCACCGTGGTGCACCGTTGACAGAAGGTTCAATTGATCCAAAACAATTATTACAAGTTCGTGATGTTTTATCTGTTGAAAACTACCTATTACGTGAAGTACAACGTGTTTACCGTATGCAAGGGGTAGAAATCGGCGACAAACATATCGAAGTAATGGTTCGCCAAATGTTACGTAAAATCCGCGTAATGGATCCAGGTGACACTGAAATCCTTCCAGGAACATTAATGGACATCGCAGAATTTAAAGACCGTAACTACGACACATTAGTTGCTGGTGGCGTCCCTGCTACTAGTCGTCCAGTCTTACTTGGTATTACCAAAGCGTCATTGGAAACAAACAGCTTCTTATCTGCTGCATCCTTCCAAGAAACAACACGCGTGTTAACAGATGCTGCTATCCGTGGCAAAAAAGATCCATTACTTGGATTGAAAGAAAATGTTATCATTGGTAAAATCATCCCAGCTGGTACTGGTATGGCTCGTTACCGTAACATGGAACCAAAAGAAGTTGGCGTAGCTAGCGAAAACGTTTATAGTATTTCAGACATTGAAGCACAAATGGCTGCTGAAGATGCGATGAAAAACATCAATAAATAA
PROTEIN sequence
Length: 1218
LIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWECACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDMSPRALEEVIYFASYVVIEPGDTTLEKKQLLTEREYREKREQYGQAFKAAMGAEAVKQLLDNVDLDGEVAQLKEELKTASGQKRTRAIRRLDILEAFRASGNQPSWMVMDVIPVIPPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKEMAIELFKPFVMRELVQREIATNIKNAKRKIERGEDEVWDILEEVIQEHPVLLNRAPTLHRLGIQAFEPVLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMIFRDMNEAVLAWQNGYVHLHSRIGVQTTLLGDKPFTDWQKERILITTVGKIIFNEIMPVEFPYLNEPTDYNLTVQTPDKYFVEAGTDIPAHIKEQELVLPFKKKNLGNIIAEVFKRFHITETSKMLDRMKDLGYKHSTYAGMTVGIADIMVLHEKQAIIDAAHKQVETITKQFRRGLITDDERYERVIGVWNGAKDEIQQKLIESMEARNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFISTHGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLEIEAIREGNEIIEPLDERLLGRYTRKSVVHPETGAIIIGADQLITEDLAREIVDAGIEKVTIRSVFTCNTKHGVCKHCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQAVITEVTGEVIDISEDPATRQKEVTIKGKTDTRTYTVPYTARMKVAEGDIIHRGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKIRVMDPGDTEILPGTLMDIAEFKDRNYDTLVAGGVPATSRPVLLGITKASLETNSFLSAASFQETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNMEPKEVGVASENVYSISDIEAQMAAEDAMKNINK*