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ACD80_4_13

Organism: SR1_ACD80

near complete RP 45 / 55 MC: 10 BSCG 42 / 51 ASCG 0 / 38
Location: comp(11005..11223)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 68.0
  • Bit_score: 77
  • Evalue 1.30e-12
COLD_SHOCK (db=PatternScan db_id=PS00352 from=15 to=34 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=65 evalue=1.1e-26 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPIR
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-26

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Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 219
ATGACAACTGGTATCGTAAAGTTCTTCAACAGAACTAAAAACTTTGGATTCATCACTCCAGACAATGGAGAAAAAGATGTATTCGTTCACGGAACAAATGTAATTGGTGAATCTATCGCTGATGGAGACACTGTAACATTTGACGTAGGTGAAGGAAGAAAAGGTCTTGAAGCTAAAGATGTAACAAAAACTGGTTCTGCTGCTGTGGCTGCTGAATAG
PROTEIN sequence
Length: 73
MTTGIVKFFNRTKNFGFITPDNGEKDVFVHGTNVIGESIADGDTVTFDVGEGRKGLEAKDVTKTGSAAVAAE*