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ACD80_36_11

Organism: SR1_ACD80

near complete RP 45 / 55 MC: 10 BSCG 42 / 51 ASCG 0 / 38
Location: 5600..6268

Top 3 Functional Annotations

Value Algorithm Source
rpsC; ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 220.0
  • Bit_score: 310
  • Evalue 4.60e-82
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=164 to=198 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=212 evalue=1.0e-47 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-47

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Taxonomy

ACD80 → SR1 → Bacteria

Sequences

DNA sequence
Length: 669
ATGTGATCAAAAGCCCATCCAATTGGAATGAGAGTATGAATAATGAAATCACGACCTGCAGAATGGTTCGCTAAATATAAAAGAACAGGTGCAGATTTTTTCGTTGAAGATGTTAAAATGAGAAAATTTGTGGATGACACTTTTGGTAGATCAGGTATCTCAAAGGTTATAATCAGAAAAACCGCTAAAGAATGAGAAATCATCATTTTTTCTTCAAAAGTAGGTGTCTTGATGGGTAAACAATGAGAAAAAATCAAAGAATTTGAAGAAGCTCTAAAAAAGAAATTCAATAAAGATATGAAAGTTGTCATCAAAGAAGTGAAAATTCCTGAATTATCTGCAAAGATTATGGCTGAATTTATCGCTTCACAACTTGAAGCCAGAATGCCATTCAGAAAAGTTGCAAAAAATGTATTGCAAAAAGTAATGGAAAAATGAGCTGCTGGTATCAAAATTCAGGTTGGAGGAAGACTTGGATGAGTGGATATCTCTAGATCAGAAAAATTCATCGAAGGAAGAGTATCACTTCAGACATTCAGATCAGATATCGATTTCTATTATCTTCAAGCAAGGACAAAATATGGAATGCTCGGAGTAAAAGTTTGGATTGAAAAAGGAATTCTCTATAATAAAGCATCAGCTGCTAGTACTAAAAAAATAAGTTTATAA
PROTEIN sequence
Length: 223
MGSKAHPIGMRVGIMKSRPAEWFAKYKRTGADFFVEDVKMRKFVDDTFGRSGISKVIIRKTAKEGEIIIFSSKVGVLMGKQGEKIKEFEEALKKKFNKDMKVVIKEVKIPELSAKIMAEFIASQLEARMPFRKVAKNVLQKVMEKGAAGIKIQVGGRLGGVDISRSEKFIEGRVSLQTFRSDIDFYYLQARTKYGMLGVKVWIEKGILYNKASAASTKKISL*