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ACD80_71_1

Organism: SR1_ACD80

near complete RP 45 / 55 MC: 10 BSCG 42 / 51 ASCG 0 / 38
Location: 3..518

Top 3 Functional Annotations

Value Algorithm Source
nusB; transcription antitermination protein NusB similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 165.0
  • Bit_score: 186
  • Evalue 4.60e-45
NusB (db=HMMPfam db_id=PF01029 from=68 to=163 evalue=4.4e-21 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-21
NusB-like (db=superfamily db_id=SSF48013 from=56 to=165 evalue=5.9e-18 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.90e-18

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Taxonomy

ACD80 → SR1 → Bacteria

Sequences

DNA sequence
Length: 516
CTTTCCTATTTGTATCAGCATTGTTTTTTTGTTAATCTGCTTTTGCAGGATAAAGTGATTACGGATTCATTGTTTATGGATTATATCTTCAAAACCGATACCGGGATGTACGATGATGAAAAAGTGAAACTCAAAGAAAAATTTTCAACTCATCTCAAACTCTATACTCCAGAAGATTTCAAAGAATTCATTGATTGTTTTTTTGATGAACGAGCGATAGAGGACATTGATTTCGATTACATAAGCAGGGTAGGGACTACATTCACGAAGTATATGGAGGAGATAAAAGAAAAAGTGAATACCTATGCACAGACTTTCCAATATGACCAGATGGATCCTTTGGATCAAGCGATATTCCTCCTTGGATACACTGAGTGGAAAGAATTAGAGACACCAAAAGAAGTCATCATCAATGAAATGATAGAGCTCGCAAAAAGATATTCTGATGAGTGAGCACCAAAGCTTCTCAACGGTATCATGCACAAGATCATAGCAGCAGAAAACGAAAAGATATAA
PROTEIN sequence
Length: 172
LSYLYQHCFFVNLLLQDKVITDSLFMDYIFKTDTGMYDDEKVKLKEKFSTHLKLYTPEDFKEFIDCFFDERAIEDIDFDYISRVGTTFTKYMEEIKEKVNTYAQTFQYDQMDPLDQAIFLLGYTEWKELETPKEVIINEMIELAKRYSDEGAPKLLNGIMHKIIAAENEKI*