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NECEvent2014_9_2_scaffold_1107_1

Organism: NECEvent2014_9_2_Rothia_mucilaginosa_57_4_partial

partial RP 25 / 55 MC: 2 BSCG 18 / 51 ASCG 3 / 38
Location: 146..1138

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 330.0
  • Bit_score: 636
  • Evalue 1.60e-179
DNA-directed RNA polymerase subunit alpha n=2 Tax=Rothia mucilaginosa RepID=C6R3L5_9MICC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 330.0
  • Bit_score: 638
  • Evalue 4.00e-180
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 330.0
  • Bit_score: 629
  • Evalue 4.00e-178
  • rbh

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Taxonomy

Rothia mucilaginosa → Rothia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 993
GTGCTTATTGCACAGCGCCCCACTCTGACTGAAGAGGTCGTAGCGCCCAACCGCTCGCGCTTCACCATCGAGCCTCTGGAGCCCGGTTTCGGCTACACCATGGGTAACTCCCTCCGCCGTACTCTGCTGTCCTCCATCCCCGGCGCCGCTGTTACCAGCGTCCGCATTGATGGCGTACTGCACGAGTTCAGCACCGTTCCCGGCGTGACCGAGGACGTCACTGAGATCATCTTGAACATCAAGAAGCTCTCCATCTCTTCTGAGAACGACGAGCCCGTCGTGGCCTACCTGCGCAAGCAGGGCGAAGGTGAACTGACCGCAGGCGACATCGAGGTTCCCGCTGGCGTGGAGATCCACAACCCGGAACTGCACCTGGCAACCCTGAACGCCTCGGCAAACTTCAACGCTGAGCTGGTTATCGAGCGCGGTCGCGGCTACGTGACTGCAGCTCAGAACAAGGTCGGCGATGGCGAGATTGGCCGTATCCCGGTTGACTCCATCTACTCCCCGGTTCTGAAGGTTACCTTCAGCGTGAACGCGACCCGTGTTGAGCAGCGCACCGACTTCGACAGCCTGACCCTGGACGTCGAAACCAAGGAAGCCATCGCACCGCGTGACGCCGTTGCTTCTGCAGGCAGCACCCTGGTCGAGCTCTTCGGCCTGGCACGTGAGCTGAACATTGCAGCTGAGGGTATCGAAGTTGGCCCGTCGCCCGCCGACGAGTCCATGGCCGCTGATTTGGCACTGCCGATCGAGGACCTGAACATGTCCGTCCGCTCCTACAACTGCCTCAAGCGCGAGGGCATCCACACCGTGGGTGAGCTCGTGACCCGCAGTGAAGCTGACCTGATGGACATCCGTAACTTCGGTGCTAAGTCCATTGACGAGGTCAAGGCAAAGCTCATCGAGCTCGGCCTGGCTTTGAAGGACTCCCCTCCCGGTTTCGAGCCTGCTGCACGCCCGCTTGATGACGAAGACGGTTCCGGCGAATAA
PROTEIN sequence
Length: 331
VLIAQRPTLTEEVVAPNRSRFTIEPLEPGFGYTMGNSLRRTLLSSIPGAAVTSVRIDGVLHEFSTVPGVTEDVTEIILNIKKLSISSENDEPVVAYLRKQGEGELTAGDIEVPAGVEIHNPELHLATLNASANFNAELVIERGRGYVTAAQNKVGDGEIGRIPVDSIYSPVLKVTFSVNATRVEQRTDFDSLTLDVETKEAIAPRDAVASAGSTLVELFGLARELNIAAEGIEVGPSPADESMAADLALPIEDLNMSVRSYNCLKREGIHTVGELVTRSEADLMDIRNFGAKSIDEVKAKLIELGLALKDSPPGFEPAARPLDDEDGSGE*