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NECEvent2014_8_1_scaffold_261_1

Organism: NECEvent2014_8_1_Enterobacter_rel_to_cloacae_54_482_partial

partial RP 37 / 55 MC: 1 BSCG 37 / 51 ASCG 12 / 38 MC: 1
Location: 1..2556

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 899.0
  • Bit_score: 1070
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 898.0
  • Bit_score: 1040
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pseudomonas sp. CFII64 RepID=S6H8T0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 898.0
  • Bit_score: 1041
  • Evalue 0.0

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Taxonomy

Pseudomonas sp. 20_BN → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2556
GACGTTGTACTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCTGAGCGTATTTATCGCGCTGGCCTGGCCTCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAATACGAAAAAGATGCAAACGGCGAATTCGTTGCGAAAACCAGCCTGAAAGACACGACCGTTGGCCGTGCCATTCTGTGGATGATCGTACCGAAAGGTCTGCCTTTCTCCATCGTCAACCAGGCGCTGGGCAAGAAAGCGATCTCCAAAATGCTGAACACCTGTTACCGCATTCTGGGCCTGAAGCCGACCGTTATCTTCGCTGACCAGACTATGTACACCGGCTTTGCTTATGCAGCGCGTTCAGGTGCATCTGTTGGTATCGATGACATGGTCATCCCAGAGAAGAAACACGAGATCATCTCTGAAGCGGAAGCTGAAGTTGCTGAGATCCAGGAGCAGTTCCAGTCTGGTCTGGTTACCGCGGGCGAACGCTATAACAAAGTTATCGATATCTGGGCAGCGGCGAACGATCGTGTATCCAAAGCGATGATGGACAACCTGCAGACCGAAACCGTGATTAACCGTGACGGCGTAGAAGAGCAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCAGCACAGATTCGTCAGCTGGCAGGTATGCGTGGTCTGATGGCGAAGCCAGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACGCACGGTGCGCGTAAAGGTTTGGCGGATACCGCACTGAAAACCGCGAACTCCGGTTATCTGACGCGTCGTCTGGTAGACGTGGCGCAGGATCTGGTTGTGACCGAAGACGATTGTGGCACCCTCGAAGGTATCACCATGACCCCGGTTATCGAGGGTGGTGATGTTAAAGAGCCACTGCGCGATCGCGTACTGGGTCGTGTGACCGCGGAAGACATCCTGAAGCCGGGCACCGCAGACATTCTGGTTCCACGCAACACCCTGCTGCACGAACAGTGGTGTGACCTGCTGGAAGCGAACTCTGTTGACTCCGTGAAGGTGCGTTCCGTTGTATCCTGTGACACCGACTTTGGTGTATGTGCGCACTGCTATGGTCGTGACCTGGCGCGTGGCCACATCATCAACAAAGGTGAAGCCATCGGCGTTATCGCGGCACAGTCCATCGGTGAGCCGGGTACACAGCTGACGATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAAGGTGCGGTTATGGCGAAAGGTGATGGCGAGCAGGTTGCCGGCGGTGAAACCGTTGCAAACTGGGATCCACACACCATGCCGGTTATCACCGAAGTAAGTGGTTTCATCCGCTTCACTGACATGATCGACGGCCAGACCATTACTCGTCAGACTGACGAGCTGACTGGTCTGTCTTCTCTGGTGGTTCTGGATTCTGCTGAACGTACTACCGGCGGTAAAGATCTGCGTCCTGCACTGAAAATCGTTGATGCTCAGGGTAATGACGTTCTGATCCCAGGTACCGATATGCCTGCGCAGTACTTCCTGCCGGGTAAAGCGATTGTACAGCTGGAAGATGGCGTACAGATCAGCTCGGGTGACACCCTGGCGCGTATTCCTCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCACGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCATCTCCTTCGGTAAAGAGACCAAAGGTAAGCGCCGTCTGGTTATCACTCCAGTAGATGGCAGCGAACCGTACGAAGAGATGATTCCTAAGTGGCGTCAGCTCAACGTGTTCGAAGGTGAACGCGTAGAACGTGGTGACGTGGTTTCCGACGGTCCAGAAGCGCCGCACGACATCCTGCGTCTGCGTGGTGTGCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGCCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCAACCATCGAAAACGCGGGCAGCTCCGAGTTCCTCGAAGGCGAGCAGGTTGAATACTCACGCGTCAAGATCGCTAACCGCGAACTGGAAGCGAACGGCAAAATCGGTGCGACCTTCTCGCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCTGCAGCATCGTTCCAGGAAACGACTCGTGTCCTGACCGAAGCCGCTGTTGCAGGTAAACGTGATGAACTGCGCGGTCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCGGGTACCGGTTATGCGTACCATCAGGATCGTATGCGTCGTCGTGCTGCAGGCGAACTGCCAGCTGCACCGCAGGTTACTGCTGAAGATGCATCCGCGAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGTGGCTCCGACAACGAGTAA
PROTEIN sequence
Length: 852
DVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDANGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVLGRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAEGAVMAKGDGEQVAGGETVANWDPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIENAGSSEFLEGEQVEYSRVKIANRELEANGKIGATFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPAAPQVTAEDASASLAELLNAGLGGSDNE*